Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_029054.1 Length=10182 Score E Sequences producing significant alignments: (Bits) Value seq2801 114 8e-22 >seq2801 Length=191572 Score = 114 bits (126), Expect = 8e-22 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 8814 ATGCATCTACAACATGATGGGGAAGAGAGAAAAGAAACCATCTGAATTCGGGAGAGCCAA 8873 |||| | ||||||| ||||||||||||||| ||||| || || ||||| | || || Sbjct 184821 ATGCTTGTACAACACGATGGGGAAGAGAGATAAGAAGCCCAGGGAGTTCGGCAATGCGAA 184880 Query 8874 AGGAAGCAGGGCAATCTGGTACATGTGGCTTGGGGCTCGCTTTCTGGAGTTTGAGGCACT 8933 |||||| ||| |||||||||||||||||| || || ||| |||| |||||||| || Sbjct 184881 AGGAAGTCGGGTAATCTGGTACATGTGGCTAGGAAGCCGTTTTTTGGAATTTGAGGCCCT 184940 Query 8934 GGGATTCCTCAATGAAGA 8951 ||| ||||| || || || Sbjct 184941 GGGCTTCCTAAACGAGGA 184958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32456680261944