Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_033697.1 Length=10173 Score E Sequences producing significant alignments: (Bits) Value seq2801 93.3 3e-15 >seq2801 Length=191572 Score = 93.3 bits (102), Expect = 3e-15 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 8805 ATGCATCTACAACATGATGGGCAAAAGAGAAAAGAAACCAGCTGAGTTTGGAAAGGCCAA 8864 |||| | ||||||| |||||| || ||||| ||||| || ||||| || || || || Sbjct 184821 ATGCTTGTACAACACGATGGGGAAGAGAGATAAGAAGCCCAGGGAGTTCGGCAATGCGAA 184880 Query 8865 GGGTAGTAGAGCCATCTGGTACATGTGGTTGGGAGCCCGCTTCCTGGAATTCGAAGCGCT 8924 || ||| | | ||||||||||||||| | ||| ||| || ||||||| || || || Sbjct 184881 AGGAAGTCGGGTAATCTGGTACATGTGGCTAGGAAGCCGTTTTTTGGAATTTGAGGCCCT 184940 Query 8925 AGGATTCCTGAATGAGGAT 8943 || ||||| || |||||| Sbjct 184941 GGGCTTCCTAAACGAGGAT 184959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32427889593468