Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_033725.1 Length=10203 Score E Sequences producing significant alignments: (Bits) Value seq2801 98.7 6e-17 >seq2801 Length=191572 Score = 98.7 bits (108), Expect = 6e-17 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 8773 GATCCAAGATTTTGGGAATTGGTTAGTGAAGAGAGGGAGCTACACTTACAAGGAAAATGC 8832 || || ||||| ||| | |||| ||| ||||| ||||| ||| | || | ||| Sbjct 184756 GACCCGAGATTCTGGAAGATGGTGGATGAGGAGAGAGAGCTGCACCTCAGGGGTGAGTGC 184815 Query 8833 TCCACATGCATCTACAACATGATGGGAAAAAGAGAGAAGAAACCCGCTGAATTCGGACGT 8892 |||| | ||||||| |||||| || ||||| ||||| ||| || ||||| | Sbjct 184816 AGGCTATGCTTGTACAACACGATGGGGAAGAGAGATAAGAAGCCCAGGGAGTTCGGCAAT 184875 Query 8893 GCCAAGGGAAGCAGAGCCATATGGTACATGTGGCTCGGAGCTAGGTTCCTTGAATTTGAG 8952 || || ||||| | | || |||||||||||||| ||| | || | ||||||||| Sbjct 184876 GCGAAAGGAAGTCGGGTAATCTGGTACATGTGGCTAGGAAGCCGTTTTTTGGAATTTGAG 184935 Query 8953 GCCCTGGGTTTCCTCAATGAAGAT 8976 |||||||| ||||| || || ||| Sbjct 184936 GCCCTGGGCTTCCTAAACGAGGAT 184959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32523858488388