Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_034007.1 Length=10131 Score E Sequences producing significant alignments: (Bits) Value seq2801 95.1 8e-16 >seq2801 Length=191572 Score = 95.1 bits (104), Expect = 8e-16 Identities = 138/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 8717 AGGCTGTTCAAGATCCCAGATTTTGGAACTTGGTTGACAAGGMGAGAAATTTACACCTGC 8776 |||||||| ||| || ||||| ||||| |||| || ||| |||| | | ||||| | Sbjct 184745 AGGCTGTTGCAGACCCGAGATTCTGGAAGATGGTGGATGAGGAGAGAGAGCTGCACCT-C 184803 Query 8777 AAGGAAAATGTGAAACCT--GCATTTACAACCTTATGGGGAAGAGAGAAAAGAAACCAGG 8834 | || | ||| | || || | |||||| |||||||||||||| ||||| || | Sbjct 184804 AGGGGTGA-GTGCAGGCTATGCTTGTACAACACGATGGGGAAGAGAGATAAGAAGCCCAG 184862 Query 8835 GGATTTCGGTGTTGCCAAAGGAAGCAGGACCATCTGGTACATGTGGCTTGGTGCCAGGTT 8894 ||| ||||| ||| |||||||| || ||||||||||||||||| || | | || Sbjct 184863 GGAGTTCGGCAATGCGAAAGGAAGTCGGGTAATCTGGTACATGTGGCTAGGAAGCCGTTT 184922 Query 8895 CTTAGAGTTTGA 8906 || || ||||| Sbjct 184923 TTTGGAATTTGA 184934 Lambda K H 0.636 0.409 0.916 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32293533140580