Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= NC_034204.1 Length=10897 Score E Sequences producing significant alignments: (Bits) Value seq2801 78.8 6e-11 >seq2801 Length=191572 Score = 78.8 bits (86), Expect = 6e-11 Identities = 118/166 (71%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 8978 CTGCATCTCAAAGGAGACTGCGAGATGTGCGTGTACAACACAATGGGGAAGAAAGAAAAG 9037 ||||| |||| || || ||| | | ||| |||||||||| |||||||||| ||| ||| Sbjct 184795 CTGCACCTCAGGGGTGAGTGCAGGCTATGCTTGTACAACACGATGGGGAAGAGAGATAAG 184854 Query 9038 AAACCGACGGTGGCTGGAGAACCAAAAGG--GTCAAGAACCATTTGGTACATGTGGCTCG 9095 || || | || | || | | ||||| ||| | | || |||||||||||||| | Sbjct 184855 AAGCCCAGGGAGTTCGGCAATGCGAAAGGAAGTCGGGTA--ATCTGGTACATGTGGCTAG 184912 Query 9096 GCAGTCGCTACCTTGAATACGAGGCCCTCGGATTTCTCAATGAGGA 9141 | || || | | |||| |||||||| || || || || ||||| Sbjct 184913 GAAGCCGTTTTTTGGAATTTGAGGCCCTGGGCTTCCTAAACGAGGA 184958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34743938924204