Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_013135.1 Length=12390 Score E Sequences producing significant alignments: (Bits) Value seq7137 78.8 7e-11 >seq7137 Length=338409 Score = 78.8 bits (86), Expect = 7e-11 Identities = 132/191 (69%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 8280 CTCATCATAAATCATGATGAAACTATCAAAAGCACCGAGTATATGAATTACGGAAAGACT 8339 || ||||| || ||||||| ||||| | || ||| ||||||| ||||| || Sbjct 154035 CTTATCATTAACAATGATGAGACTATGTAGTCTGGTGATTATTTGAATTATGGAAAAACC 153976 Query 8340 TGTGTCATCCATGGCAATATTAGAAACCTTGAGACAAAGAGATGGTCCAGAGTAACCTGT 8399 || | | ||| |||||| | | || ||||||||||| || |||| || |||||| Sbjct 153975 CAGGTGTTTCGTGGAAATATTCGCGAACTAGAGACAAAGAGGTGACCCAGGGTGACCTGT 153916 Query 8400 GTAACTAATGATCAACTACCTACCCTATCAAATGTCATGGCCACGATTGGAAGCAATGCC 8459 | | |||||||||| | || || || ||| | ||| |||| | |||||||||| Sbjct 153915 GCAGCTAATGATCAGGTTCCATCCATAGGGAATTTGATGTCCACCGTCACAAGCAATGCC 153856 Query 8460 CTGACAGTCTC 8470 | ||||| || Sbjct 153855 TTAACAGTTTC 153845 Score = 78.8 bits (86), Expect = 7e-11 Identities = 132/191 (69%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 8280 CTCATCATAAATCATGATGAAACTATCAAAAGCACCGAGTATATGAATTACGGAAAGACT 8339 || ||||| || ||||||| ||||| | || ||| ||||||| ||||| || Sbjct 155498 CTTATCATTAACAATGATGAGACTATGTAGTCTGGTGATTATTTGAATTATGGAAAAACC 155439 Query 8340 TGTGTCATCCATGGCAATATTAGAAACCTTGAGACAAAGAGATGGTCCAGAGTAACCTGT 8399 || | | ||| |||||| | | || ||||||||||| || |||| || |||||| Sbjct 155438 CAGGTGTTTCGTGGAAATATTCGCGAACTAGAGACAAAGAGGTGACCCAGGGTGACCTGT 155379 Query 8400 GTAACTAATGATCAACTACCTACCCTATCAAATGTCATGGCCACGATTGGAAGCAATGCC 8459 | | |||||||||| | || || || ||| | ||| |||| | |||||||||| Sbjct 155378 GCAGCTAATGATCAGGTTCCATCCATAGGGAATTTGATGTCCACCGTCACAAGCAATGCC 155319 Query 8460 CTGACAGTCTC 8470 | ||||| || Sbjct 155318 TTAACAGTTTC 155308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39528939622080