Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_013135.1
Length=12390
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 78.8 7e-11
>seq7137
Length=338409
Score = 78.8 bits (86), Expect = 7e-11
Identities = 132/191 (69%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 8280 CTCATCATAAATCATGATGAAACTATCAAAAGCACCGAGTATATGAATTACGGAAAGACT 8339
|| ||||| || ||||||| ||||| | || ||| ||||||| ||||| ||
Sbjct 154035 CTTATCATTAACAATGATGAGACTATGTAGTCTGGTGATTATTTGAATTATGGAAAAACC 153976
Query 8340 TGTGTCATCCATGGCAATATTAGAAACCTTGAGACAAAGAGATGGTCCAGAGTAACCTGT 8399
|| | | ||| |||||| | | || ||||||||||| || |||| || ||||||
Sbjct 153975 CAGGTGTTTCGTGGAAATATTCGCGAACTAGAGACAAAGAGGTGACCCAGGGTGACCTGT 153916
Query 8400 GTAACTAATGATCAACTACCTACCCTATCAAATGTCATGGCCACGATTGGAAGCAATGCC 8459
| | |||||||||| | || || || ||| | ||| |||| | ||||||||||
Sbjct 153915 GCAGCTAATGATCAGGTTCCATCCATAGGGAATTTGATGTCCACCGTCACAAGCAATGCC 153856
Query 8460 CTGACAGTCTC 8470
| ||||| ||
Sbjct 153855 TTAACAGTTTC 153845
Score = 78.8 bits (86), Expect = 7e-11
Identities = 132/191 (69%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 8280 CTCATCATAAATCATGATGAAACTATCAAAAGCACCGAGTATATGAATTACGGAAAGACT 8339
|| ||||| || ||||||| ||||| | || ||| ||||||| ||||| ||
Sbjct 155498 CTTATCATTAACAATGATGAGACTATGTAGTCTGGTGATTATTTGAATTATGGAAAAACC 155439
Query 8340 TGTGTCATCCATGGCAATATTAGAAACCTTGAGACAAAGAGATGGTCCAGAGTAACCTGT 8399
|| | | ||| |||||| | | || ||||||||||| || |||| || ||||||
Sbjct 155438 CAGGTGTTTCGTGGAAATATTCGCGAACTAGAGACAAAGAGGTGACCCAGGGTGACCTGT 155379
Query 8400 GTAACTAATGATCAACTACCTACCCTATCAAATGTCATGGCCACGATTGGAAGCAATGCC 8459
| | |||||||||| | || || || ||| | ||| |||| | ||||||||||
Sbjct 155378 GCAGCTAATGATCAGGTTCCATCCATAGGGAATTTGATGTCCACCGTCACAAGCAATGCC 155319
Query 8460 CTGACAGTCTC 8470
| ||||| ||
Sbjct 155318 TTAACAGTTTC 155308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39528939622080
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |