Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_020803.1
Length=11487
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 116 3e-22
>seq7137
Length=338409
Score = 116 bits (128), Expect = 3e-22
Identities = 202/292 (69%), Gaps = 4/292 (1%)
Strand=Plus/Minus
Query 6930 TGTGTTCAGAGTCATGGGACAATTCCTAGGATATCCCAGTTTGATCGAAAAAACTCATGA 6989
||| || | ||||||||| |||||||| || ||||||| ||||| | |||||||||
Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847
Query 6990 CTTTTTTCAAGACAGCTTGATTTATTACAATGGGAGACCAGACCTGATGGAAGTGAGGGG 7049
|| ||| | | ||| | ||||||| |||| ||| |||| |||||| ||| |
Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGA 155787
Query 7050 GAATGAATTATTGAACAAAACAGACAAGCTTGTCTGTTGGGATGGTCAGGCTGGAGGACT 7109
| | | ||||||| ||| | || ||||||| | || || || || |||||
Sbjct 155786 TGGTAAGGTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACT 155727
Query 7110 GGAAGGACTGAGACAAAAGGGATGGAGCATATTGAATCTACTTGTGATTCAGAGAGAGTC 7169
|||||| | | |||||||||||||| | |||||| |||| ||| ||| | ||
Sbjct 155726 GGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTG---TTC-TAGAAAATC 155671
Query 7170 CAAAATCAGAAACACCAAAGTGCAAACATTGGCTCAGGGAGACAATCAAGTT 7221
|||| | || || | || ||| || ||||||| ||||| ||||||||
Sbjct 155670 AAAAAGTACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTT 155619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36639621791520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |