Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_020803.1 Length=11487 Score E Sequences producing significant alignments: (Bits) Value seq7137 116 3e-22 >seq7137 Length=338409 Score = 116 bits (128), Expect = 3e-22 Identities = 202/292 (69%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 6930 TGTGTTCAGAGTCATGGGACAATTCCTAGGATATCCCAGTTTGATCGAAAAAACTCATGA 6989 ||| || | ||||||||| |||||||| || ||||||| ||||| | ||||||||| Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847 Query 6990 CTTTTTTCAAGACAGCTTGATTTATTACAATGGGAGACCAGACCTGATGGAAGTGAGGGG 7049 || ||| | | ||| | ||||||| |||| ||| |||| |||||| ||| | Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGA 155787 Query 7050 GAATGAATTATTGAACAAAACAGACAAGCTTGTCTGTTGGGATGGTCAGGCTGGAGGACT 7109 | | | ||||||| ||| | || ||||||| | || || || || ||||| Sbjct 155786 TGGTAAGGTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACT 155727 Query 7110 GGAAGGACTGAGACAAAAGGGATGGAGCATATTGAATCTACTTGTGATTCAGAGAGAGTC 7169 |||||| | | |||||||||||||| | |||||| |||| ||| ||| | || Sbjct 155726 GGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTG---TTC-TAGAAAATC 155671 Query 7170 CAAAATCAGAAACACCAAAGTGCAAACATTGGCTCAGGGAGACAATCAAGTT 7221 |||| | || || | || ||| || ||||||| ||||| |||||||| Sbjct 155670 AAAAAGTACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTT 155619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36639621791520