Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_020805.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq7137 116 3e-22 >seq7137 Length=338409 Score = 116 bits (128), Expect = 3e-22 Identities = 212/310 (68%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 6592 TGTGTTTAAAGTCATGGGACAATTCTTGGGTTATCCAAATTTGATATACCGGACACATGA 6651 ||| |||||||||||||| |||||| |||||||||| || ||||| | | || ||||| Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847 Query 6652 GTTTTTTGAGAAAAGTTTAATTTACTATAATGAAAGACCGGATCTCATGAAAGTCAGAAA 6711 ||| |||||||| || | ||||| | |||||| ||| | ||| | ||| || | Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGA 155787 Query 6712 TGGGATCTTAGAAAATAGCACACATCAGAGGGTTTGCTGGAATGGACAGGCAGGTGGTTT 6771 ||| | | | || | ||| ||||| || || | || || || || || || | Sbjct 155786 TGGTAAGGTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACT 155727 Query 6772 AGAAGGTTTGAGACAGAAAGGATGGAGTATTCTTAATTTGCTGGTCATACAGAGAGAAGC 6831 |||||||| | || || |||||||||| ||| |||| || | ||| || | Sbjct 155726 GGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGTTCT----AGAAAATC 155671 Query 6832 GAAAATCCGGAATACCGCAGTTAAAGTGCTAGCACAAGGCGACAATCAAGTCATATGTAC 6891 |||| |||||| | || ||| | || ||||| || ||||||| |||| ||| Sbjct 155670 AAAAAGTACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATATAC 155611 Query 6892 ACAGTACAAG 6901 |||||| ||| Sbjct 155610 ACAGTATAAG 155601 Score = 104 bits (114), Expect = 2e-18 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 6582 CCAATGGACCTGTGTTTAAAGTCATGGGACAATTCTTGGGTTATCCAAATTTGATATACC 6641 ||||||| ||||| |||||||||||||| |||||| |||||||||| || ||||| | Sbjct 154237 CCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGA 154178 Query 6642 GGACACATGAGTTTTTTGAGAAAAGTTTAATTTACTATAATGAAAGA 6688 | || |||||||| |||||||| || | ||||| | |||||| ||| Sbjct 154177 GAACTCATGAGTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGA 154131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35465336471680