Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_020805.1
Length=11120
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 116 3e-22
>seq7137
Length=338409
Score = 116 bits (128), Expect = 3e-22
Identities = 212/310 (68%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 6592 TGTGTTTAAAGTCATGGGACAATTCTTGGGTTATCCAAATTTGATATACCGGACACATGA 6651
||| |||||||||||||| |||||| |||||||||| || ||||| | | || |||||
Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847
Query 6652 GTTTTTTGAGAAAAGTTTAATTTACTATAATGAAAGACCGGATCTCATGAAAGTCAGAAA 6711
||| |||||||| || | ||||| | |||||| ||| | ||| | ||| || |
Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGA 155787
Query 6712 TGGGATCTTAGAAAATAGCACACATCAGAGGGTTTGCTGGAATGGACAGGCAGGTGGTTT 6771
||| | | | || | ||| ||||| || || | || || || || || || |
Sbjct 155786 TGGTAAGGTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACT 155727
Query 6772 AGAAGGTTTGAGACAGAAAGGATGGAGTATTCTTAATTTGCTGGTCATACAGAGAGAAGC 6831
|||||||| | || || |||||||||| ||| |||| || | ||| || |
Sbjct 155726 GGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGTTCT----AGAAAATC 155671
Query 6832 GAAAATCCGGAATACCGCAGTTAAAGTGCTAGCACAAGGCGACAATCAAGTCATATGTAC 6891
|||| |||||| | || ||| | || ||||| || ||||||| |||| |||
Sbjct 155670 AAAAAGTACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATATAC 155611
Query 6892 ACAGTACAAG 6901
|||||| |||
Sbjct 155610 ACAGTATAAG 155601
Score = 104 bits (114), Expect = 2e-18
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 6582 CCAATGGACCTGTGTTTAAAGTCATGGGACAATTCTTGGGTTATCCAAATTTGATATACC 6641
||||||| ||||| |||||||||||||| |||||| |||||||||| || ||||| |
Sbjct 154237 CCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGA 154178
Query 6642 GGACACATGAGTTTTTTGAGAAAAGTTTAATTTACTATAATGAAAGA 6688
| || |||||||| |||||||| || | ||||| | |||||| |||
Sbjct 154177 GAACTCATGAGTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGA 154131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35465336471680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |