Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_022755.1 Length=10692 Score E Sequences producing significant alignments: (Bits) Value seq7137 111 1e-20 >seq7137 Length=338409 Score = 111 bits (122), Expect = 1e-20 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 6234 TGTCTTCAGAGTCATGGGTCAGTTCCTAGGGTATCCAAATTTAATTTACCGGACGCATGA 6293 ||| || | |||||||||||| ||||| || ||||| || || |||| | || ||||| Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847 Query 6294 GTTTTTTGAGAATAGCCTCATATATTACAATAACAGACCCGACCTGATGAGAGTGGTGAA 6353 ||| ||||||||||||||||| |||| ||| | ||| | || ||||| ||| | Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGA 155787 Query 6354 TAATACCGTGGAGAACAGTTCTGATCAAAGAGTCTGCTGGAATGGTCAGGCAGGGGGGCT 6413 | || || | ||||| | || |||||||| | || || || || ||||| || Sbjct 155786 TGGTAAGGTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACT 155727 Query 6414 CGAAGGACTGCGGCAAAAAGGATGGAGTA 6442 ||||| | || ||||| |||||||||| Sbjct 155726 GGAAGGTTTACGCCAAAAGGGATGGAGTA 155698 Score = 104 bits (114), Expect = 2e-18 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 6224 CCAATGGTCCTGTCTTCAGAGTCATGGGTCAGTTCCTAGGGTATCCAAATTTAATTTACC 6283 ||||||||||||| || | |||||||||||| ||||| || ||||| || || |||| Sbjct 154237 CCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGA 154178 Query 6284 GGACGCATGAGTTTTTTGAGAATAGCCTCATATATTACAATAACAGA 6330 | || |||||||| ||||||||||||||||| |||| ||| | ||| Sbjct 154177 GAACTCATGAGTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGA 154131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34095870213120