Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_025255.1
Length=11135
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 105 5e-19
>seq7137
Length=338409
Score = 105 bits (116), Expect = 5e-19
Identities = 213/311 (68%), Gaps = 10/311 (3%)
Strand=Plus/Minus
Query 6558 GTGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAGAGAACTCATGAA 6617
|| || || || |||||||||||| |||| ||||| ||||| ||||||||||||
Sbjct 155905 GTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAG 155846
Query 6618 TTTTTTGAGAAGAGTCTGATATATTACAATGGACGACCAGATCTGATG--CGGGTTCGA- 6674
|| |||||||| || || || |||| |||| || ||||| ||||| | || ||
Sbjct 155845 TTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGAT 155786
Query 6675 GGAAATTCTCTAGTCAACGCCTCATCTTTAAATGTCTGCTGGGAGGGTCAAGCTGGGGGA 6734
|| || | || ||| |||| | ||||| | | || ||||| ||||||
Sbjct 155785 GGTAA---GGTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGA 155729
Query 6735 TTAGAAGGACTGCGACAGAAGGGATGGAGTATTCTAAATTTGCTTGTCATTCAGAGAGAA 6794
| ||||| | || || ||||||||||||| ||| |||||| ||| ||| ||
Sbjct 155728 CTGGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTG---TTC-TAGAAAA 155673
Query 6795 GCAAAAATAAGGAACACCGCCGTGAAAGTGCTAGCTCAAGGTGACAATCAGGTGATATGT 6854
|||||| | ||| || | || ||| | |||||||| || |||| || |||| |
Sbjct 155672 TCAAAAAGTACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATAT 155613
Query 6855 ACTCAGTATAA 6865
|| ||||||||
Sbjct 155612 ACACAGTATAA 155602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35513331784480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |