Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_025255.1 Length=11135 Score E Sequences producing significant alignments: (Bits) Value seq7137 105 5e-19 >seq7137 Length=338409 Score = 105 bits (116), Expect = 5e-19 Identities = 213/311 (68%), Gaps = 10/311 (3%) Strand=Plus/Minus Query 6558 GTGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAGAGAACTCATGAA 6617 || || || || |||||||||||| |||| ||||| ||||| |||||||||||| Sbjct 155905 GTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAG 155846 Query 6618 TTTTTTGAGAAGAGTCTGATATATTACAATGGACGACCAGATCTGATG--CGGGTTCGA- 6674 || |||||||| || || || |||| |||| || ||||| ||||| | || || Sbjct 155845 TTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGAT 155786 Query 6675 GGAAATTCTCTAGTCAACGCCTCATCTTTAAATGTCTGCTGGGAGGGTCAAGCTGGGGGA 6734 || || | || ||| |||| | ||||| | | || ||||| |||||| Sbjct 155785 GGTAA---GGTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGA 155729 Query 6735 TTAGAAGGACTGCGACAGAAGGGATGGAGTATTCTAAATTTGCTTGTCATTCAGAGAGAA 6794 | ||||| | || || ||||||||||||| ||| |||||| ||| ||| || Sbjct 155728 CTGGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTG---TTC-TAGAAAA 155673 Query 6795 GCAAAAATAAGGAACACCGCCGTGAAAGTGCTAGCTCAAGGTGACAATCAGGTGATATGT 6854 |||||| | ||| || | || ||| | |||||||| || |||| || |||| | Sbjct 155672 TCAAAAAGTACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATAT 155613 Query 6855 ACTCAGTATAA 6865 || |||||||| Sbjct 155612 ACACAGTATAA 155602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35513331784480