Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_025371.1 Length=11082 Score E Sequences producing significant alignments: (Bits) Value seq7137 120 2e-23 >seq7137 Length=338409 Score = 120 bits (132), Expect = 2e-23 Identities = 348/529 (66%), Gaps = 14/529 (3%) Strand=Plus/Minus Query 6590 GTCATGGGACAATTTTTGGGATATCCCCGGCTGTTTGAGAGAACTCACGAGTTCTTTGAA 6649 |||||||| ||||| |||| |||||| || || ||||||||| ||||||||||| Sbjct 155896 GTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGAG 155837 Query 6650 TCCAGCCTCATTTACTACAATGGCAGACCAGATTTGATGGATGTGAGGGGAGATTCTTTG 6709 ||||||||||| | |||| ||| |||||||||||| |||| | | | | Sbjct 155836 AATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGATGGTAAGGTT 155777 Query 6710 GTCAACACCACAGAAAAGCTGGTTTGTTGGGAAGGCCAAGCAGGAGGGCTAGAAGGATTG 6769 || |||| ||| || || |||| | |||||||| || || || ||||| || Sbjct 155776 GTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTGGAAGGTTTA 155717 Query 6770 AGGCAAAAAGGATGGAGCGTGTTGAATCTACTAGTCATCAATAGAGAGTCATCCATCAGG 6829 | ||||| |||||||| |||||| || || || |||| | ||| | | | Sbjct 155716 CGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGT--TC--TAGAAAATCAAAAAGTACG 155661 Query 6830 AACACGATAGTCAAAGTATTAGCTCAGGGAGACAATCAGGTCATATGCACCCAGTACAAG 6889 || || ||| ||| | | ||||| ||||| |||| || |||| || ||||| ||| Sbjct 155660 AATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATATACACAGTATAAG 155601 Query 6890 ACAAAAAATTACAAGAATGAAGAAGAGCTTAAGATGCTCTTGTC--AGCCATGGTAGACA 6947 | | | | | | || || | | || |||| ||| | || || || | | Sbjct 155600 CCTCATACT---ACGGAT--AGTA-AACTGAAGA--CTCATATCCAAGAAATCTCAAGGA 155549 Query 6948 ACAACCAAACTATCATGGATAGTATTGTGACAGGGACAGGCAAATTGGGACTAATCATCA 7007 |||| | | |||||| | | | | | || ||| | | ||| || ||||| | Sbjct 155548 ACAATGAGAACATCATGAAAAATGTGGAAGATGGAACACGAGAGCTGGCCCTTATCATTA 155489 Query 7008 ACAATGATGAAACTATGCAATCTGCTGATTATCTCAATTATGGAAAGATGCCAGTATTCC 7067 |||||||||| |||||| | |||| ||||||| | ||||||||||| | | || || | Sbjct 155488 ACAATGATGAGACTATGTAGTCTGGTGATTATTTGAATTATGGAAAAACCCAGGTGTTTC 155429 Query 7068 GAGGCATCCTACGAGGGCTGGAGACTAAGAGATGGTCCAGAGTCACATG 7116 | || | | || | || ||||| ||||| || |||| || || || Sbjct 155428 GTGGAAATATTCGCGAACTAGAGACAAAGAGGTGACCCAGGGTGACCTG 155380 Score = 80.6 bits (88), Expect = 2e-11 Identities = 100/137 (73%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 6980 GGGACAGGCAAATTGGGACTAATCATCAACAATGATGAAACTATGCAATCTGCTGATTAT 7039 || ||| | || ||| || ||||| ||||||||||| |||||||| |||| ||||||| Sbjct 146315 GGAACACGAAAGCTGGCCCTTATCATTAACAATGATGAGACTATGCAGTCTGGTGATTAT 146256 Query 7040 CTCAATTATGGAAAGATGCCAGTATTCCGAGGCATCCTACGAGGGCTGGAGACTAAGAGA 7099 | ||||||||||| | || || || || || | | || || || ||| | ||||| Sbjct 146255 TTGAATTATGGAAAAACGCAGGTGTTTCGTGGAAATATTCGCGGACTAGAGGCAAAGAGG 146196 Query 7100 TGGTCCAGAGTCACATG 7116 || |||| || || || Sbjct 146195 TGACCCAGGGTGACCTG 146179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35343748345920