Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_025378.1 Length=11202 Score E Sequences producing significant alignments: (Bits) Value seq7137 102 6e-18 >seq7137 Length=338409 Score = 102 bits (112), Expect = 6e-18 Identities = 357/549 (65%), Gaps = 20/549 (4%) Strand=Plus/Minus Query 6634 AGTAATGGGCCAATTCTTGGGCTTCCCCAATCTGATATCCAGAACGCACGAATTCTTTGA 6693 ||| ||||| |||||| |||| | ||||| |||| | ||||| || || |||||||| Sbjct 155897 AGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGA 155838 Query 6694 GAAAAGTTTGGTTTATTACAATGGCCGGCCAGATTTGATGAGAGTATC---GGGGAATTC 6750 ||| || | |||||| |||| | ||||||||||| || || || || Sbjct 155837 GAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGATGGTAAGGT 155778 Query 6751 TTTGACAAACACGACCAACCTGAGGGTTTGCTGGGAGGGCCAAGCCGGCGGTCTGGAAGG 6810 | || |||| ||| || ||| || || | | ||||||||||| || |||||||| Sbjct 155777 TGTG---AACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTGGAAGG 155721 Query 6811 TTTGCGGCAGAAGGGATGGAGCATTTTGAACCTACTGGTGATTCAAAGAGAAGCCAAAAT 6870 ||| || || ||||||||||| | ||| || || | ||| ||| || | |||| Sbjct 155720 TTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTG---TTC-TAGAAAATCAAAAAG 155665 Query 6871 CCGGAACACCTCAGTGAAAGTTCTAGCACAGGGAGACAATCAGGTGATCTGTACCCAGTA 6930 ||| || || ||| | || || ||||| |||| || || | ||| ||||| Sbjct 155664 TACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATATACACAGTA 155605 Query 6931 CAAAACCAGAAACCACAGGGACTCCA-TCGAGCTCCATAGCGCTTTGCAGGACATCCAAA 6989 || || | || || | | | | | || |||| | || || ||| || Sbjct 155604 -TAAGCCTCATACTACGGATAGTAAACTGAAGACTCATA------TCCAAGAAATCTCAA 155552 Query 6990 GTAATAACGACGCCATCATGTCTGCCATAGAACGTGGTACCACTA-AGTTAGGACTTGTG 7048 | || || || ||||||| | ||| ||| | ||| | || | | ||| | Sbjct 155551 GGAACAATGAGAACATCATGAAAAATGTGGAAGATGG-AACACGAGAGCTGGCCCTTATC 155493 Query 7049 ATCAACCAAGATGAGACCATGCAATCCGCCGATTATTTGAATTATGGGAAGATTCCGATT 7108 || ||| | |||||||| ||| | || | ||||||||||||||||| || | | | | Sbjct 155492 ATTAACAATGATGAGACTATGTAGTCTGGTGATTATTTGAATTATGGAAAAACCCAGGTG 155433 Query 7109 TTCCGTGGAACAATTCGTGGACTCGAATTCAAAAGATGGTCTAGAGTGACATGTGTGACC 7168 || ||||||| ||||| | ||| || || || || | || ||||| |||| | Sbjct 155432 TTTCGTGGAAATATTCGCGAACTAGAGACAAAGAGGTGACCCAGGGTGACCTGTGCAGCT 155373 Query 7169 AATGATCAG 7177 ||||||||| Sbjct 155372 AATGATCAG 155364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35727710848320