Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_025387.1
Length=11492
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 134 1e-27
>seq7137
Length=338409
Score = 134 bits (148), Expect = 1e-27
Identities = 418/625 (67%), Gaps = 24/625 (4%)
Strand=Plus/Minus
Query 6877 CAACAGATATGTATTCAGAGTTATGGGTCAATGTTTGGGGTACCCTAACTTGATTGAACG 6936
|| || | |||| || | ||| |||||||||| |||| || || ||||||||| |
Sbjct 155915 CAGCACAAATGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAG 155856
Query 6937 GACTCATGAGTTCTTTGAGAACAGTTTGGTTTATTTGAACATGAGACCAGATGAGATGG- 6995
|||||||||||||||||||| || | |||||| || ||| ||||| |||||
Sbjct 155855 AACTCATGAGTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGC 155796
Query 6996 TG-GTC-GATGGTAGACATGTTCGACCGAGAGGGGACATGATGTCCTGTTGGGAGGGACA 7053
|| ||| ||||||| ||| || | ||| || ||| |||| | || ||
Sbjct 155795 TGTGTCTGATGGTAAGGTTGT--GAACAAGACATCCCAGAGAGTC-TGTTATAACGGCCA 155739
Query 7054 AGCAGGTGGTCTGGAAGGGCTGAGGCAGAAGGGGTGGAGCATCCTCAACCTGCTTCTGAT 7113
||| || || |||||||| | | || ||||| ||||| | | || |||||| | |
Sbjct 155738 AGCCGGGGGACTGGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGTTCT 155679
Query 7114 CAGAAGGATCTCaaaaatccgaaatacaaaaataaaaatATTGGCGCAAGGGGACAATCA 7173
|||| ||| |||| | |||| |||| | | || | |||| ||||| || ||||
Sbjct 155678 -AGAAA-ATCA-AAAAGTACGAA-TACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCA 155623
Query 7174 GGTCATCTGTACACAGTACAAGTTGCCATCA-ACCAGGAATGAGAAAGAGACTGTTGACG 7232
|| || | ||||||||| ||| | ||| || | | || || || |||| |||
Sbjct 155622 AGTTATATATACACAGTATAAG----CCTCATACTACGGAT-AGTAA---ACTGAAGACT 155571
Query 7233 CC-ATAAAAGGCATGGTCCAG-AACAACAATGCCATCATGGAGTCTATAGAAGAAGGGAC 7290
| || ||| || || || ||||| | ||||||| | | | ||||| || ||
Sbjct 155570 CATATCCAAGAAATC-TCAAGGAACAATGAGAACATCATGAAAAATGTGGAAGATGGAAC 155512
Query 7291 CAAGA-AGTTGGGCTTGCTCATAAACCAAGATGAGACAGTCCAATGTGCAGACTACATGA 7349
| || || ||| | | |||| ||| | |||||||| | | | || || || |||
Sbjct 155511 -ACGAGAGCTGGCCCTTATCATTAACAATGATGAGACTATGTAGTCTGGTGATTATTTGA 155453
Query 7350 ATTATGGAAAGGTCCCAATCTTCAGAGGGAACATTAGAGGCCTGGAGACCAAGAGGTGGT 7409
|||||||||| || | || | || || ||| | | || ||||| ||||||||
Sbjct 155452 ATTATGGAAAAACCCAGGTGTTTCGTGGAAATATTCGCGAACTAGAGACAAAGAGGTGAC 155393
Query 7410 CCAGGGTCACATGTGTTACCAACGATCAGCTCCCAACTTTTGCTAATGTGATGTCCTCCG 7469
||||||| || |||| | || |||||| | ||| | | | ||| |||||||| |||
Sbjct 155392 CCAGGGTGACCTGTGCAGCTAATGATCAGGTTCCATCCATAGGGAATTTGATGTCCACCG 155333
Query 7470 TCTCTACCAATGCTTTGACAGTGTC 7494
|| | | |||||| || ||||| ||
Sbjct 155332 TCACAAGCAATGCCTTAACAGTTTC 155308
Score = 82.4 bits (90), Expect = 6e-12
Identities = 159/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 7264 CATCATGGAGTCTATAGAAGAAGGGACCAAGA-AGTTGGGCTTGCTCATAAACCAAGATG 7322
||||||| | | | ||||| || || | || || ||| | | |||| ||| | ||||
Sbjct 154075 CATCATGAAAAATGTGGAAGATGGAAC-ACGAGAGCTGGCCCTTATCATTAACAATGATG 154017
Query 7323 AGACAGTCCAATGTGCAGACTACATGAATTATGGAAAGGTCCCAATCTTCAGAGGGAACA 7382
|||| | | | || || || ||||||||||||| || | || | || || |
Sbjct 154016 AGACTATGTAGTCTGGTGATTATTTGAATTATGGAAAAACCCAGGTGTTTCGTGGAAATA 153957
Query 7383 TTAGAGGCCTGGAGACCAAGAGGTGGTCCAGGGTCACATGTGTTACCAACGATCAGCTCC 7442
|| | | || ||||| |||||||| ||||||| || |||| | || |||||| | |
Sbjct 153956 TTCGCGAACTAGAGACAAAGAGGTGACCCAGGGTGACCTGTGCAGCTAATGATCAGGTTC 153897
Query 7443 CAACTTTTGCTAATGTGATGTCCTCCGTCTCTACCAATGCTTTGACAGTGTC 7494
|| | | | ||| |||||||| ||||| | | |||||| || ||||| ||
Sbjct 153896 CATCCATAGGGAATTTGATGTCCACCGTCACAAGCAATGCCTTAACAGTTTC 153845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36655620229120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |