Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_025392.1 Length=11121 Score E Sequences producing significant alignments: (Bits) Value seq7137 131 1e-26 >seq7137 Length=338409 Score = 131 bits (144), Expect = 1e-26 Identities = 224/318 (70%), Gaps = 14/318 (4%) Strand=Plus/Minus Query 6555 TGTATTCAAAGTGATGGGACAATTTCTGGGATATCCAAATTTGATATCACGCACCCATGA 6614 ||| || ||||| ||||| ||||| ||||| ||||| || ||||| | | || ||||| Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847 Query 6615 ATTCTTTGAGAAGAGTTTGATTTATTATAATGGAAGACCCGATTTGATG--AGAGTCCGG 6672 ||||||||||| || | ||||||| ||||| ||| | ||||||||| | ||| | Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTG- 155788 Query 6673 AATGGAGTGGTTGAGAATTCCTCAGATAC--TAGAGTATGTTGGAATGGACAAGCCGGGG 6730 |||| ||||| ||| | | || | ||||| |||| || || |||||||||| Sbjct 155787 -ATGGTAAGGTTGTGAA--CAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGG 155731 Query 6731 GTCTAGAGGGTTTGAGACAGAAGGGCTGGAGCATCCTAAATTTGTTGGTTATACAGAGGG 6790 | || || ||||| | || ||||| ||||| | | ||| || | ||| | || Sbjct 155730 GACTGGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGTTCT----AGAA 155675 Query 6791 AATCCAAAA-TCCGTAATACATCTGTCAAGGTATTGGCACAAGGAGACAATCAAGTAATT 6849 |||| |||| | || |||||| ||| | | | |||| |||||||| ||||||| || Sbjct 155674 AATCAAAAAGTACG-AATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATA 155616 Query 6850 TGTACCCAATACAAGACT 6867 | ||| || || ||| || Sbjct 155615 TATACACAGTATAAGCCT 155598 Score = 82.4 bits (90), Expect = 5e-12 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 6527 ATCACCAGAGAAGAACATCAAACGAACCTGTATTCAAAGTGATGGGACAATTTCTGGGAT 6586 ||||||||||| | | || | ||||| || ||||| ||||| ||||| ||||| | Sbjct 154255 ATCACCAGAGAGGTCAGGCCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTT 154196 Query 6587 ATCCAAATTTGATATCACGCACCCATGAATTCTTTGAGAAGAGTTTGATTTATTATAATG 6646 |||| || ||||| | | || ||||| ||||||||||| || | ||||||| ||||| Sbjct 154195 ATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGAGAATAGCCTCATTTATTCTAATG 154136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35468536159200