Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_025392.1
Length=11121
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 131 1e-26
>seq7137
Length=338409
Score = 131 bits (144), Expect = 1e-26
Identities = 224/318 (70%), Gaps = 14/318 (4%)
Strand=Plus/Minus
Query 6555 TGTATTCAAAGTGATGGGACAATTTCTGGGATATCCAAATTTGATATCACGCACCCATGA 6614
||| || ||||| ||||| ||||| ||||| ||||| || ||||| | | || |||||
Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847
Query 6615 ATTCTTTGAGAAGAGTTTGATTTATTATAATGGAAGACCCGATTTGATG--AGAGTCCGG 6672
||||||||||| || | ||||||| ||||| ||| | ||||||||| | ||| |
Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTG- 155788
Query 6673 AATGGAGTGGTTGAGAATTCCTCAGATAC--TAGAGTATGTTGGAATGGACAAGCCGGGG 6730
|||| ||||| ||| | | || | ||||| |||| || || ||||||||||
Sbjct 155787 -ATGGTAAGGTTGTGAA--CAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGG 155731
Query 6731 GTCTAGAGGGTTTGAGACAGAAGGGCTGGAGCATCCTAAATTTGTTGGTTATACAGAGGG 6790
| || || ||||| | || ||||| ||||| | | ||| || | ||| | ||
Sbjct 155730 GACTGGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGTTCT----AGAA 155675
Query 6791 AATCCAAAA-TCCGTAATACATCTGTCAAGGTATTGGCACAAGGAGACAATCAAGTAATT 6849
|||| |||| | || |||||| ||| | | | |||| |||||||| ||||||| ||
Sbjct 155674 AATCAAAAAGTACG-AATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATA 155616
Query 6850 TGTACCCAATACAAGACT 6867
| ||| || || ||| ||
Sbjct 155615 TATACACAGTATAAGCCT 155598
Score = 82.4 bits (90), Expect = 5e-12
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 6527 ATCACCAGAGAAGAACATCAAACGAACCTGTATTCAAAGTGATGGGACAATTTCTGGGAT 6586
||||||||||| | | || | ||||| || ||||| ||||| ||||| ||||| |
Sbjct 154255 ATCACCAGAGAGGTCAGGCCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTT 154196
Query 6587 ATCCAAATTTGATATCACGCACCCATGAATTCTTTGAGAAGAGTTTGATTTATTATAATG 6646
|||| || ||||| | | || ||||| ||||||||||| || | ||||||| |||||
Sbjct 154195 ATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGAGAATAGCCTCATTTATTCTAATG 154136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35468536159200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |