Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_025394.1
Length=11103
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 87.8 1e-13
>seq7137
Length=338409
Score = 87.8 bits (96), Expect = 1e-13
Identities = 202/303 (67%), Gaps = 10/303 (3%)
Strand=Plus/Minus
Query 6561 GTCATGGGTCAGTTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAATTCTTTGAA 6620
||||||||||| ||| |||| | ||| ||| | || | || |||||||| ||||||||
Sbjct 155896 GTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGAG 155837
Query 6621 AAAAGTCTGATATATTACAATGGGAGACCAGATTTGATGAAAGTG---CAAGGAAATTCA 6677
|| || || || |||| |||| ||| ||||||||||| ||| | || ||
Sbjct 155836 AATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGATGGTAA---G 155780
Query 6678 TTAGTCAATAACAGCAATCAGCGGGTATGTTGGAACGGACAGGCAGGAGGTTTGGAGGGC 6737
| || || || | ||| | || |||| ||||| || || || || |||| ||
Sbjct 155779 GTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTGGAAGGT 155720
Query 6738 TTGAGGCAAAAGGGATGGAGTATTTTGAACCTATTGGTTATCCAGCGAGAATCCAAGATC 6797
|| | |||||||||||||||| ||| || | ||| | || |||| || |
Sbjct 155719 TTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGTTCT----AGAAAATCAAAAAGT 155664
Query 6798 AGAAATACCGCAGTGAAGGTGTTGGCACAGGGTGATAATCAAGTAATCTGTACTCAATAC 6857
| ||||| | || | | |||| || || ||| ||||||| || | ||| || ||
Sbjct 155663 ACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATATACACAGTAT 155604
Query 6858 AAG 6860
|||
Sbjct 155603 AAG 155601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35410941783840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |