Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_025394.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq7137 87.8 1e-13 >seq7137 Length=338409 Score = 87.8 bits (96), Expect = 1e-13 Identities = 202/303 (67%), Gaps = 10/303 (3%) Strand=Plus/Minus Query 6561 GTCATGGGTCAGTTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAATTCTTTGAA 6620 ||||||||||| ||| |||| | ||| ||| | || | || |||||||| |||||||| Sbjct 155896 GTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGAG 155837 Query 6621 AAAAGTCTGATATATTACAATGGGAGACCAGATTTGATGAAAGTG---CAAGGAAATTCA 6677 || || || || |||| |||| ||| ||||||||||| ||| | || || Sbjct 155836 AATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGATGGTAA---G 155780 Query 6678 TTAGTCAATAACAGCAATCAGCGGGTATGTTGGAACGGACAGGCAGGAGGTTTGGAGGGC 6737 | || || || | ||| | || |||| ||||| || || || || |||| || Sbjct 155779 GTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTGGAAGGT 155720 Query 6738 TTGAGGCAAAAGGGATGGAGTATTTTGAACCTATTGGTTATCCAGCGAGAATCCAAGATC 6797 || | |||||||||||||||| ||| || | ||| | || |||| || | Sbjct 155719 TTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGTTCT----AGAAAATCAAAAAGT 155664 Query 6798 AGAAATACCGCAGTGAAGGTGTTGGCACAGGGTGATAATCAAGTAATCTGTACTCAATAC 6857 | ||||| | || | | |||| || || ||| ||||||| || | ||| || || Sbjct 155663 ACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATATACACAGTAT 155604 Query 6858 AAG 6860 ||| Sbjct 155603 AAG 155601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35410941783840