Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_025406.1
Length=11141
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 91.5 1e-14
>seq7137
Length=338409
Score = 91.5 bits (100), Expect = 1e-14
Identities = 203/301 (67%), Gaps = 14/301 (5%)
Strand=Plus/Minus
Query 6610 GTGATGGGCCAATTCTTGGGCTATCCATCTTTGATAGAGAGAACGCATGAGTTCTTTGAG 6669
|| ||||| |||||| |||| ||||| ||||| |||||| |||||||||||||||
Sbjct 155896 GTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGAG 155837
Query 6670 AAAAGTCTTGTTTATTACAATGGTAGACCAGACTTGATGAAGGTAGAAAATGGTGTAGTA 6729
|| || || |||||| |||| |||| |||| |||||| || ||||| ||
Sbjct 155836 AATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGATGGTAAGGTT 155777
Query 6730 TTGAATAAAACAGATAATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGACTG 6789
|||| || ||| | ||| || | || || ||||| ||||| | || || |
Sbjct 155776 GTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTGGAAGGTTTA 155717
Query 6790 AGACAAAAAGGTTGGAGTA----TACTCAACTTGTTGGTGATTAGACGTGAGTCCAAAA- 6844
| ||||| || ||||||| | || |||||| |||| | || ||||
Sbjct 155716 CGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGTT-----CTAGA---AAATCAAAAAG 155665
Query 6845 TCCGCAATACAAGGGTTCAGACATTAGCACAGGGAGACAATCAAGTGATCTGTACACAGT 6904
| || |||||| ||| || || | || || ||||| ||||||| || | ||||||||
Sbjct 155664 TACG-AATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATATACACAGT 155606
Query 6905 A 6905
|
Sbjct 155605 A 155605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35532529909600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |