Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_025406.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq7137 91.5 1e-14 >seq7137 Length=338409 Score = 91.5 bits (100), Expect = 1e-14 Identities = 203/301 (67%), Gaps = 14/301 (5%) Strand=Plus/Minus Query 6610 GTGATGGGCCAATTCTTGGGCTATCCATCTTTGATAGAGAGAACGCATGAGTTCTTTGAG 6669 || ||||| |||||| |||| ||||| ||||| |||||| ||||||||||||||| Sbjct 155896 GTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGAG 155837 Query 6670 AAAAGTCTTGTTTATTACAATGGTAGACCAGACTTGATGAAGGTAGAAAATGGTGTAGTA 6729 || || || |||||| |||| |||| |||| |||||| || ||||| || Sbjct 155836 AATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGATGGTAAGGTT 155777 Query 6730 TTGAATAAAACAGATAATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGACTG 6789 |||| || ||| | ||| || | || || ||||| ||||| | || || | Sbjct 155776 GTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTGGAAGGTTTA 155717 Query 6790 AGACAAAAAGGTTGGAGTA----TACTCAACTTGTTGGTGATTAGACGTGAGTCCAAAA- 6844 | ||||| || ||||||| | || |||||| |||| | || |||| Sbjct 155716 CGCCAAAAGGGATGGAGTACCGCGAATCTGCTTGTT-----CTAGA---AAATCAAAAAG 155665 Query 6845 TCCGCAATACAAGGGTTCAGACATTAGCACAGGGAGACAATCAAGTGATCTGTACACAGT 6904 | || |||||| ||| || || | || || ||||| ||||||| || | |||||||| Sbjct 155664 TACG-AATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATATATACACAGT 155606 Query 6905 A 6905 | Sbjct 155605 A 155605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35532529909600