Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_028234.1 Length=12162 Score E Sequences producing significant alignments: (Bits) Value seq7137 82.4 6e-12 >seq7137 Length=338409 Score = 82.4 bits (90), Expect = 6e-12 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 7671 ATGTTTTTAAAGTTATGGGGCAATTCTTAGGTTATCCTAATTTAATTGTCAGAACCCATG 7730 ||||||||||||| ||||| |||||| | |||||||| || || ||| | ||||| |||| Sbjct 155907 ATGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATG 155848 Query 7731 AGTTTTTTGAAAAAAGTGTCATATA 7755 |||| ||||| || || |||| || Sbjct 155847 AGTTCTTTGAGAATAGCCTCATTTA 155823 Score = 80.6 bits (88), Expect = 2e-11 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 7672 TGTTTTTAAAGTTATGGGGCAATTCTTAGGTTATCCTAATTTAATTGTCAGAACCCATGA 7731 |||||||||||| ||||| |||||| | |||||||| || || ||| | ||||| ||||| Sbjct 154227 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 154168 Query 7732 GTTTTTTGAAAAAAGTGTCATATA 7755 ||| ||||| || || |||| || Sbjct 154167 GTTCTTTGAGAATAGCCTCATTTA 154144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38799410867520