Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_028236.1 Length=11072 Score E Sequences producing significant alignments: (Bits) Value seq7137 104 2e-18 >seq7137 Length=338409 Score = 104 bits (114), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 6515 GTTTTCAAAGTCATGGGTCAGTTTTTGGGGTATCCCAATTTAATATACCGGACACATGAA 6574 ||||| |||||||||||||| || |||| |||||||| || || | | || ||||| Sbjct 155905 GTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAG 155846 Query 6575 TTCTTTGAAAATAGCTGGATATACTACAATGGGAGACCTGACCTGATGACTGTCAGGGAT 6634 |||||||| |||||| || || | |||| ||| | || ||||| |||| ||| Sbjct 155845 TTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGAT 155786 Query 6635 GG-AAGACTGCTTAACAGCACCCCTCAAAGAGTGTGTTGGGAGGGACAACTGGGAGGATT 6693 || ||| || | |||| || | || ||||| |||| | || ||| || ||| | Sbjct 155785 GGTAAGGTTG-TGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACT 155727 Query 6694 GGAGGGTTTAAGACAAAAGGGATGGA 6719 ||| |||||| | ||||||||||||| Sbjct 155726 GGAAGGTTTACGCCAAAAGGGATGGA 155701 Score = 84.2 bits (92), Expect = 2e-12 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 6486 ATCACCAAAGAAAGGATGCCACTGGTCCAGTTTTCAAAGTCATGGGTCAGTTTTTGGGGT 6545 ||||||| ||| | |||| |||||| ||||| |||||||||||||| || |||| | Sbjct 154255 ATCACCAGAGAGGTCAGGCCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTT 154196 Query 6546 ATCCCAATTTAATATACCGGACACATGAATTCTTTGAAAATAGC 6589 ||||||| || || | | || ||||| |||||||| |||||| Sbjct 154195 ATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGAGAATAGC 154152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35311751470720