Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_028236.1
Length=11072
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 104 2e-18
>seq7137
Length=338409
Score = 104 bits (114), Expect = 2e-18
Identities = 148/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 6515 GTTTTCAAAGTCATGGGTCAGTTTTTGGGGTATCCCAATTTAATATACCGGACACATGAA 6574
||||| |||||||||||||| || |||| |||||||| || || | | || |||||
Sbjct 155905 GTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAG 155846
Query 6575 TTCTTTGAAAATAGCTGGATATACTACAATGGGAGACCTGACCTGATGACTGTCAGGGAT 6634
|||||||| |||||| || || | |||| ||| | || ||||| |||| |||
Sbjct 155845 TTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGAT 155786
Query 6635 GG-AAGACTGCTTAACAGCACCCCTCAAAGAGTGTGTTGGGAGGGACAACTGGGAGGATT 6693
|| ||| || | |||| || | || ||||| |||| | || ||| || ||| |
Sbjct 155785 GGTAAGGTTG-TGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACT 155727
Query 6694 GGAGGGTTTAAGACAAAAGGGATGGA 6719
||| |||||| | |||||||||||||
Sbjct 155726 GGAAGGTTTACGCCAAAAGGGATGGA 155701
Score = 84.2 bits (92), Expect = 2e-12
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 6486 ATCACCAAAGAAAGGATGCCACTGGTCCAGTTTTCAAAGTCATGGGTCAGTTTTTGGGGT 6545
||||||| ||| | |||| |||||| ||||| |||||||||||||| || |||| |
Sbjct 154255 ATCACCAGAGAGGTCAGGCCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTT 154196
Query 6546 ATCCCAATTTAATATACCGGACACATGAATTCTTTGAAAATAGC 6589
||||||| || || | | || ||||| |||||||| ||||||
Sbjct 154195 ATCCCAACTTGATTTTGAGAACTCATGAGTTCTTTGAGAATAGC 154152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35311751470720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |