Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_031236.1
Length=11165
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 104 2e-18
>seq7137
Length=338409
Score = 104 bits (114), Expect = 2e-18
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 6532 GTCTTCAAAGTCATGGGACAGTTTCTGGGGTATCCAAATCTTATATATCGAACACATGAG 6591
|| || ||||||||||| || || ||||| ||||| || | || | |||| ||||||
Sbjct 155905 GTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAG 155846
Query 6592 TTCTTCCAGAAAAGCATCATTTACTACAATGATAGGCCGGATTTGATGGTAGTAGAGAAC 6651
||||| |||| ||| ||||||| | |||||||| | |||||||||| || |
Sbjct 155845 TTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGAT 155786
Query 6652 GGGATGATAGTGAATCGCACTGAAGAGAGAGTAGTGTGGAACGGACAAGCTGGGGGATTG 6711
|| | | | ||||| || ||||||| | ||||| ||||| |||||| ||
Sbjct 155785 GGTAAGGTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTG 155726
Query 6712 GAAGGATTAAGGCAGAAAGGATGGAGT 6738
||||| ||| | || || |||||||||
Sbjct 155725 GAAGGTTTACGCCAAAAGGGATGGAGT 155699
Score = 80.6 bits (88), Expect = 2e-11
Identities = 83/109 (76%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 6518 AGTCCAACGGACCGGTCTTCAAAGTCATGGGACAGTTTCTGGGGTATCCAAATCTTATAT 6577
|| |||| || || || || ||||||||||| || || ||||| ||||| || | || |
Sbjct 154240 AGGCCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTT 154181
Query 6578 ATCGAACACATGAGTTCTTCCAGAAAAGCATCATTTACTACAATGATAG 6626
|||| ||||||||||| |||| ||| ||||||| | ||||||||
Sbjct 154180 TGAGAACTCATGAGTTCTTTGAGAATAGCCTCATTTATTCTAATGATAG 154132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35609322410080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |