Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_031236.1 Length=11165 Score E Sequences producing significant alignments: (Bits) Value seq7137 104 2e-18 >seq7137 Length=338409 Score = 104 bits (114), Expect = 2e-18 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 6532 GTCTTCAAAGTCATGGGACAGTTTCTGGGGTATCCAAATCTTATATATCGAACACATGAG 6591 || || ||||||||||| || || ||||| ||||| || | || | |||| |||||| Sbjct 155905 GTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGAG 155846 Query 6592 TTCTTCCAGAAAAGCATCATTTACTACAATGATAGGCCGGATTTGATGGTAGTAGAGAAC 6651 ||||| |||| ||| ||||||| | |||||||| | |||||||||| || | Sbjct 155845 TTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGAT 155786 Query 6652 GGGATGATAGTGAATCGCACTGAAGAGAGAGTAGTGTGGAACGGACAAGCTGGGGGATTG 6711 || | | | ||||| || ||||||| | ||||| ||||| |||||| || Sbjct 155785 GGTAAGGTTGTGAACAAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGGGACTG 155726 Query 6712 GAAGGATTAAGGCAGAAAGGATGGAGT 6738 ||||| ||| | || || ||||||||| Sbjct 155725 GAAGGTTTACGCCAAAAGGGATGGAGT 155699 Score = 80.6 bits (88), Expect = 2e-11 Identities = 83/109 (76%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 6518 AGTCCAACGGACCGGTCTTCAAAGTCATGGGACAGTTTCTGGGGTATCCAAATCTTATAT 6577 || |||| || || || || ||||||||||| || || ||||| ||||| || | || | Sbjct 154240 AGGCCAATGGTCCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTT 154181 Query 6578 ATCGAACACATGAGTTCTTCCAGAAAAGCATCATTTACTACAATGATAG 6626 |||| ||||||||||| |||| ||| ||||||| | |||||||| Sbjct 154180 TGAGAACTCATGAGTTCTTTGAGAATAGCCTCATTTATTCTAATGATAG 154132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35609322410080