Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_031278.1
Length=12247
Score E
Sequences producing significant alignments: (Bits) Value
seq7137 116 3e-22
>seq7137
Length=338409
Score = 116 bits (128), Expect = 3e-22
Identities = 405/619 (65%), Gaps = 25/619 (4%)
Strand=Plus/Minus
Query 7592 TGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTCATGA 7651
||| || | ||||||||| ||||||| || ||||| || || ||| ||||||||||||
Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847
Query 7652 GTTCTTCGAGAAAAGCTTCATTTACCACGGCGGTAGAGCAGACTTAATGAAGATCTCCAA 7711
|||||| ||||| ||| ||||||| | ||||||||| || ||| | || |
Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGA 155787
Query 7712 CGGCAACATAGTTAACAAG-GATCCCAGTAAGATGGTATGCTGGCAGGGCCAGAAGGGCG 7770
|| || | || |||||| ||||||| ||| || || | | ||||| || |
Sbjct 155786 TGGTAAGGTTGTGAACAAGACATCCCAG--AGA--GTCTGTTATAACGGCCAAGCCGGGG 155731
Query 7771 GATTGGAAGGACTTCGACAAAAGGGGTGGAGCATATTGAATCTATTAGTCATTCGAAGGG 7830
|| ||||||| | || |||||||| ||||| | |||||| | | ||| ||
Sbjct 155730 GACTGGAAGGTTTACGCCAAAAGGGATGGAGTACCGCGAATCTGCTTG---TTC-TAGAA 155675
Query 7831 AAGGACAAGACCGGAACACCCGAATCCGATGCTTAGCTCAAGGAGATAATCAGGTTATCT 7890
|| | || ||| || ||| | | |||||||||||| |||| ||||| |
Sbjct 155674 AATCAAAAAGTACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTATAT 155615
Query 7891 GTACACAATATAAACTTCAAAAATTTCGAACTGAAGAGGAGCTGAAAACCAACATAACCA 7950
|||||| ||||| | || | | | || | | | | ||||| || |||| |||
Sbjct 155614 ATACACAGTATAAGCCTC--ATACTACGGATAGTA----AACTGAAGAC--TCATATCCA 155563
Query 7951 --ACATCGTTGCCAATAATCAATACATTTTAAAGAGAATCGAAGATGGAACAAAGAAAAT 8008
| ||| || ||| | |||| | || | | |||||||||||| | |
Sbjct 155562 AGAAATCTCAAGGAACAATGAGAACATCATGAAAAATGTGGAAGATGGAACACGAGAGCT 155503
Query 8009 CGGTCTCATGATAAACCAAGATGAGACCATGCAGAGTGCGGACTATTTAAACTACGGGAA 8068
| || || || ||| | |||||||| ||| || || || ||||| || || || ||
Sbjct 155502 GGCCCTTATCATTAACAATGATGAGACTATGTAGTCTGGTGATTATTTGAATTATGGAAA 155443
Query 8069 AATTCCCA--TATTCCGGGGGAATATGAG-GAACTTGGAGACAAAGCGATGGGCCCGTGT 8125
|| |||| | || || || ||||| | |||| | ||||||||| | || || | ||
Sbjct 155442 AA--CCCAGGTGTTTCGTGGAAATATTCGCGAAC-TAGAGACAAAGAGGTGACCCAGGGT 155386
Query 8126 TACCTGTGTCACAAATGATCAAGTACCCACTCTAGCAAATACCATGTCTACTGTATCCAC 8185
||||||| | |||||||| || || | ||| ||| ||||| || || | |
Sbjct 155385 GACCTGTGCAGCTAATGATCAGGTTCCATCCATAGGGAATTTGATGTCCACCGTCACAAG 155326
Query 8186 AAATGCATTGACCGTTGCT 8204
||||| || || ||| ||
Sbjct 155325 CAATGCCTTAACAGTTTCT 155307
Score = 87.8 bits (96), Expect = 1e-13
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 7590 CCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTCAT 7649
||||| || | ||||||||| ||||||| || ||||| || || ||| ||||||||||
Sbjct 154229 CCTGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCAT 154170
Query 7650 GAGTTCTTCGAGAAAAGCTTCATTTA 7675
|||||||| ||||| ||| |||||||
Sbjct 154169 GAGTTCTTTGAGAATAGCCTCATTTA 154144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39071384306720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |