Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_031304.1 Length=10306 Score E Sequences producing significant alignments: (Bits) Value seq7137 84.2 1e-12 >seq7137 Length=338409 Score = 84.2 bits (92), Expect = 1e-12 Identities = 202/300 (67%), Gaps = 13/300 (4%) Strand=Plus/Minus Query 5593 TGTTTTTACCGTCATGGGGCAATTCCTAGGGCTTCCCAAATTAATAGCTAGGACACACGA 5652 |||||||| |||||||| |||||||| || |||||| || || || || || || Sbjct 155906 TGTTTTTAAAGTCATGGGTCAATTCCTGGGTTATCCCAACTTGATTTTGAGAACTCATGA 155847 Query 5653 ATTTTTTGAACAAAGTTTTATTTACTACGGAGATCGTCCCGATTTGATGACCATCAAGGA 5712 || ||||| | || | ||||| | ||| | | ||||||||| | | || Sbjct 155846 GTTCTTTGAGAATAGCCTCATTTATTCTAATGATAGAGCAGATTTGATGGCTGTGTCTGA 155787 Query 5713 TGGAGAAATTGTCAACGTCGATGAAAACC-AGAAAGTCTGCTGGAATGGTCAATTGGGGG 5771 ||| | |||| ||| | || | || ||| |||||| | || || ||| |||| Sbjct 155786 TGGTAAGGTTGTGAAC----AAGACATCCCAGAGAGTCTGTTATAACGGCCAAGCCGGGG 155731 Query 5772 GACTGGAAGGGCTTCGACAAAAAGGATGGAGCGTAC--TTAATCTTCTTGTGATCTTAAG 5829 |||||||||| | || ||||| ||||||| |||| ||||| ||||| ||| || Sbjct 155730 GACTGGAAGGTTTACGCCAAAAGGGATGGA--GTACCGCGAATCTGCTTGT--TCT--AG 155677 Query 5830 AGAATCTAAAATTCGAAACACGAAGGTCAGAGTCCTTGCTCAAGGGGACAATCAAGTGAT 5889 | |||| |||| | || || ||||| || | |||||||| || ||||||| || Sbjct 155676 AAAATCAAAAAGTACGAATACAGAGGTCCAAGCAGTGGCTCAAGGAGATGATCAAGTTAT 155617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32860790830400