Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_031283.1
Length=14731
Score E
Sequences producing significant alignments: (Bits) Value
seq3023 80.6 3e-11
>seq3023
Length=5802038
Score = 80.6 bits (88), Expect = 3e-11
Identities = 136/197 (69%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 9991 TTGGCCCTCCTCTCAAGAAAGAGGAAACCTGGGTATCCACCTCCCTCTTCATTTATGGAA 10050
|||| || ||| | |||||||| || || ||| || | | | |||||||||||||
Sbjct 2852901 TTGGTCCCCCTTTGAAGAAAGAAGAGACATGGTCTTCATCAGCTTTATTCATTTATGGAA 2852960
Query 10051 AATTTATAATCCTCAACGGATGCCCTCGCTCTATGTCCCAAAAGAAAATGTGCAGGATGT 10110
| ||||| ||| || || || ||| || ||||| ||||| || || | || |
Sbjct 2852961 ATTTTATTATCTATAATGGGTGTCCTTTGTCAATGTCTCAAAAAAAGATATTTAGATATT 2853020
Query 10111 TCCCTATGAGCAATGAGGGATTTCCAACAACAGAAACCGCATTGTCCTCTGTAGTTGCAA 10170
| |||| ||||||||| |||||| | || || || ||| | || ||| ||| ||| |
Sbjct 2853021 TTCCTACGAGCAATGAAGGATTTTCTACCGTTGAGACGGCAATTTCATCTATAGCTGCTA 2853080
Query 10171 ACGGATCCGCTGCCTGT 10187
|| | || || || |||
Sbjct 2853081 ACTGCTCTGCAGCTTGT 2853097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 47013444036660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |