Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_013135.1 Length=12390 Score E Sequences producing significant alignments: (Bits) Value seq4882 239 4e-59 seq473 205 7e-49 seq1 201 9e-48 seq3836 134 1e-27 seq6848 114 1e-21 seq5378 89.7 4e-14 >seq4882 Length=1799 Score = 239 bits (264), Expect = 4e-59 Identities = 588/881 (67%), Gaps = 18/881 (2%) Strand=Plus/Plus Query 1601 TGGGATCACAAAAACGCCTTGGGTGAGTTTGAAAGCAATGCAGAATTGGATGTATACAAT 1660 |||||| | || | || | ||||| || ||||| | | || |||||||| | || Sbjct 859 TGGGATAAGAACAGAGCACTAGGTGACTTGGAAAGTGACTCGGACCTGGATGTACATAAC 918 Query 1661 GAAGGCATTGCGTAcccccccTCGATTGACGAGATGGAGGTAGGTGAGGGAAGACCAACT 1720 || ||||| ||| |||| || || || || ||||| || ||||| | | || | ||| Sbjct 919 GAGGGCATAGCGGACCCTCCTTCAGGCGATGATATGGATGTTGGTGATGAACGAACCACT 978 Query 1721 TTAGACAAGATCTTGGAATCCTCCATAGGCTCGGATTCTTTACCGAACTTAGAGGACGGA 1780 |||| | || |||| || | || | |||||| || | |||||||||||||||||| Sbjct 979 CTAGATAGTATATTGGGCTCTACTATGGACTCGGAATCAGTCCCGAACTTAGAGGACGGA 1038 Query 1781 CCACCAGATCAAGAGGCAGCCTACCATGAAGGGGAGATGTATTCAACTATGATGACTAGT 1840 | || |||| || ||| ||| |||| || ||||||||| | | ||| | | | Sbjct 1039 CTCCCCGATCCTGAATTAGCATACAATGAGGGTGAGATGTATGCGAGGATGGCCGCCAAT 1098 Query 1841 TACATGGATCAAGATAATGAGA-ACATGGACCTGAGTGCGGGACC-----GACTTGTTCC 1894 || || | |||| |||| ||| || || || | | ||||||| Sbjct 1099 -AC-----TCCACATAAAGAGACACAAGGGATGGATGACGACAAACTGGTGTCTTGTTCT 1152 Query 1895 ACTCCTCAACCTATTACCGGGATCCACCACAAAGAGACAATTAATGGCCGG-GTCACCCA 1953 |||||| ||| | ||| || ||||| || | |||| || ||| |||| | Sbjct 1153 ACTCCTGTACCGAATACTAAATATCATCACAAGGAATTAGTTAACGGTCGGAGTCATA-A 1211 Query 1954 GATGGTTTACATCGGTGAAACCTCTGATATGGCACTCATTAATAGATTGCAAGATGAATT 2013 ||||||||| || ||| || ||||| |||| |||| | ||||| || || ||||| || Sbjct 1212 GATGGTTTATATAGGTCCCACTTCTGACATGGGACTCGTCAATAGGTTACAGGATGAGTT 1271 Query 2014 TGATGTTTTGTACAACACGTACCCGAATCGTAACAAACAAGGAGAGATTGTA-CACCTGA 2072 |||| | || | || | ||| ||| |||| || || || | ||| || ||| Sbjct 1272 CGATGCACTTTATGAGACTTGCCCCAATTCTAACGGCCAGGG-GATAAAGTATCAGTTGA 1330 Query 2073 TAGTAATGTGGAGCACCCCTCTTAAACCTAGCACTCGATACTCACTATCGCCAGCCCAAC 2132 | || |||||||||||||| | ||| || | | || | || |||| || || | Sbjct 1331 TGGTCATGTGGAGCACCCCCCATAACCCGACTGCGCGCTTTTCTTTATCACCCAATCAGC 1390 Query 2133 CTCCCGGCAAGAAGAGGAAGATTGTTCAACACTCC-TCAAATCCAGAGCCAGAGATAGTA 2191 | | || ||||| |||||||| || |||| | | | || || ||||| | || Sbjct 1391 CATCAGGGAAGAAAAGGAAGATCGT-CAACTATGCATGGAACCCTGAGCCGGCCTCGGTG 1449 Query 2192 TTCGTTCCGGAACCCACTTCGTCAGAGCAGTCATTACCTGAGCGTCAAATAAAAGCGTAT 2251 ||||| || || ||| ||| ||||| || | ||||| || || || ||| | ||| Sbjct 1450 TTCGTACCTGAGCCCGAGGTGTCTGAGCAATCCCTTCCTGAACGGCAGATTAAAACATAT 1509 Query 2252 CTCCAGCGAGGGATAGAACTCAAGGGGAAGTCAGCAGAGGTTCCCAACTTCAAGATCACC 2311 ||| | ||| ||||| || | || || || | || | || || || || |||||| Sbjct 1510 CTCAGGAAAGGAATAGAGCTTAGAGGAAAAACATCTGATATCCCTAATTTTAAAATCACC 1569 Query 2312 AACGAGACTTTGGGTTTCTCTGATGCAAACCTCAAGTTACTATACCCCGATACCTCTTTG 2371 || || || ||||| || || ||| | | || || || ||||||| || || ||| || Sbjct 1570 AATGAAACCTTGGGCTTTTCGAATGAAGATCTTAAAGTATTATACCCTGACACATCTATG 1629 Query 2372 TATCCTGACAATCCTGTGTTTATATTAGAAGATGTGTTTGCATCCACTAGACAACTAAAC 2431 ||||| |||||||| || || | || || ||||| || ||| || | || | || Sbjct 1630 TATCCGGACAATCCAGTATTCGTCTTGGAGGATGTATTCACATATACCAAGCAGTTGAAT 1689 Query 2432 AAGATCAAGGTAAATTACCAGTTGTATGACCCGGTACTCCC 2472 || |||||||||||||| || |||||||||| || ||||| Sbjct 1690 AAAATCAAGGTAAATTATCAACTGTATGACCCAGTGCTCCC 1730 >seq473 Length=28832112 Score = 205 bits (226), Expect = 7e-49 Identities = 528/794 (66%), Gaps = 18/794 (2%) Strand=Plus/Plus Query 1688 GACGAGATGGAGGTAGGTGAGGGAAGACCAACTTTAGACAAGATCTTGGAATCCTCCATA 1747 || || ||||| || ||||| | | || | ||| |||| | || |||| || | || Sbjct 6849159 GATGATATGGATGTTGGTGATGAACGAACCACTCTAGATAGTATATTGGGCTCTACTATG 6849218 Query 1748 GGCTCGGATTCTTTACCGAACTTAGAGGACGGACCACCAGATCAAGAGGCAGCCTACCAT 1807 | |||||| || | ||||||||||||||||||| || |||| || ||| ||| || Sbjct 6849219 GACTCGGAATCAGTCCCGAACTTAGAGGACGGACTCCCCGATCCTGAATTAGCATACAAT 6849278 Query 1808 GAAGGGGAGATGTATTCAACTATGATGACTAGTTACATGGATCAAGATAATGAGA-ACAT 1866 || || ||||||||| | | ||| | | | || || | |||| |||| ||| Sbjct 6849279 GAGGGTGAGATGTATGCGAGGATGGCCGCCAAT-AC-----TCCACATAAAGAGACACAA 6849332 Query 1867 GGACCTGAGTGCGGGACC-----GACTTGTTCCACTCCTCAACCTATTACCGGGATCCAC 1921 || || || | | |||||| |||||| ||| | ||| || Sbjct 6849333 GGGATGGATGACGACAAACTGGTGTCTTGTTTTACTCCTGTACCGAATACTAAATATCAT 6849392 Query 1922 CACAAAGAGACAATTAATGGCCGG-GTCACCCAGATGGTTTACATCGGTGAAACCTCTGA 1980 ||||| || | |||| || ||| |||| |||||||||| || ||| || ||||| Sbjct 6849393 CACAAGGAATTAGTTAACGGTCGGAGTCATA-AGATGGTTTATATAGGTCCCACTTCTGA 6849451 Query 1981 TATGGCACTCATTAATAGATTGCAAGATGAATTTGATGTTTTGTACAACACGTACCCGAA 2040 |||| |||| | ||||| || || ||||| || |||| | || | || | ||| || Sbjct 6849452 CATGGGACTCGTCAATAGGTTACAGGATGAGTTCGATGCACTTTATGAGACTTGCCCCAA 6849511 Query 2041 TCGTAACAAACAAGGAGAGATTGTA-CACCTGATAGTAATGTGGAGCACCCCTCTTAAAC 2099 | |||| || || || | ||| || |||| || |||||||||||||| | ||| | Sbjct 6849512 TTCTAACGGCCAGGG-GATAAAGTATCAGTTGATGGTCATGTGGAGCACCCCCCATAACC 6849570 Query 2100 CTAGCACTCGATACTCACTATCGCCAGCCCAACCTCCCGGCAAGAAGAGGAAGATTGTTC 2159 | | | || | || |||| || || || | || ||||| |||||||| || | Sbjct 6849571 CGACTGCGCGCTTTTCTTTATCACCCAATCAGCCATCAGGGAAGAAAAGGAAGATCGT-C 6849629 Query 2160 AACACTCC-TCAAATCCAGAGCCAGAGATAGTATTCGTTCCGGAACCCACTTCGTCAGAG 2218 ||| | | | || || ||||| | || ||||| || || ||| ||| ||| Sbjct 6849630 AACTATGCATGGAACCCTGAGCCGGCCTCGGTGTTCGTACCTGAGCCCGAGGTGTCTGAG 6849689 Query 2219 CAGTCATTACCTGAGCGTCAAATAAAAGCGTATCTCCAGCGAGGGATAGAACTCAAGGGG 2278 || || | ||||| || || || ||| | |||||| | ||| ||||| || | || Sbjct 6849690 CAATCCCTTCCTGAACGGCAGATTAAAACATATCTCAGGAAAGGAATAGAGCTTAGAGGA 6849749 Query 2279 AAGTCAGCAGAGGTTCCCAACTTCAAGATCACCAACGAGACTTTGGGTTTCTCTGATGCA 2338 || || | || | || || || || |||||||| || || ||||| || || ||| | Sbjct 6849750 AAAACATCTGATATCCCTAATTTTAAAATCACCAATGAAACCTTGGGCTTTTCGAATGAA 6849809 Query 2339 AACCTCAAGTTACTATACCCCGATACCTCTTTGTATCCTGACAATCCTGTGTTTATATTA 2398 | || || || ||||||| || || ||| |||| || |||||||| || || | || Sbjct 6849810 GATCTTAAAGTATTATACCCTGACACATCTATGTACCCGGACAATCCAGTATTCGTCTTG 6849869 Query 2399 GAAGATGTGTTTGCATCCACTAGACAACTAAACAAGATCAAGGTAAATTACCAGTTGTAT 2458 || ||||| || ||| || | || | || || |||||||||||||| || ||||| Sbjct 6849870 GAGGATGTATTCACATATACCAAGCAGTTGAATAAAATCAAGGTAAATTATCAACTGTAT 6849929 Query 2459 GACCCGGTACTCCC 2472 ||||| || ||||| Sbjct 6849930 GACCCAGTGCTCCC 6849943 Score = 194 bits (214), Expect = 1e-45 Identities = 540/818 (66%), Gaps = 18/818 (2%) Strand=Plus/Plus Query 1601 TGGGATCACAAAAACGCCTTGGGTGAGTTTGAAAGCAATGCAGAATTGGATGTATACAAT 1660 |||||| | || | || | ||||| || ||||| | | || |||||||| | || Sbjct 6837979 TGGGATAAGAACAGAGCACTAGGTGACTTGGAAAGTGACTCGGACCTGGATGTACATAAC 6838038 Query 1661 GAAGGCATTGCGTAcccccccTCGATTGACGAGATGGAGGTAGGTGAGGGAAGACCAACT 1720 || ||||| ||| |||| || || || || ||||| || ||||| | | || | ||| Sbjct 6838039 GAGGGCATAGCGGACCCTCCTTCAGGCGATGATATGGATGTTGGTGATGAACGAACCACT 6838098 Query 1721 TTAGACAAGATCTTGGAATCCTCCATAGGCTCGGATTCTTTACCGAACTTAGAGGACGGA 1780 |||| | || |||| || | || | |||||| || | |||||||||||||||||| Sbjct 6838099 CTAGATAGTATATTGGGCTCTACTATGGACTCGGAATCAGTCCCGAACTTAGAGGACGGA 6838158 Query 1781 CCACCAGATCAAGAGGCAGCCTACCATGAAGGGGAGATGTATTCAACTATGATGACTAGT 1840 | || |||| || ||| ||| |||| || |||||||| | | ||| | | | Sbjct 6838159 CTCCCCGATCCTGAATTAGCATACAATGAGGGTAAGATGTATGCGAGGATGGCCGCCAAT 6838218 Query 1841 TACATGGATCAAGATAATGAGA-ACATGGACCTGAGTGCGGGACC-----GACTTGTTCC 1894 || || | |||| |||| ||| || || || | | ||||||| Sbjct 6838219 -AC-----TCCACATAAAGAGACACAAGGGATGGATGACGACAAACTGGTGTCTTGTTCT 6838272 Query 1895 ACTCCTCAACCTATTACCGGGATCCACCACAAAGAGACAATTAATGGCCGG-GTCACCCA 1953 |||||| ||| | ||| || ||||| || | |||| || ||| |||| | Sbjct 6838273 ACTCCTGTACCGAATACTAAATATCATCACAAGGAATTAGTTAACGGTCGGAGTCATA-A 6838331 Query 1954 GATGGTTTACATCGGTGAAACCTCTGATATGGCACTCATTAATAGATTGCAAGATGAATT 2013 ||||||||| || ||| || ||||| |||| |||| | ||||| || || ||||| || Sbjct 6838332 GATGGTTTATATAGGTCCCACTTCTGACATGGGACTCGTCAATAGGTTACAGGATGAGTT 6838391 Query 2014 TGATGTTTTGTACAACACGTACCCGAATCGTAACAAACAAGGAGAGATTGTA-CACCTGA 2072 |||| | || | || | ||| ||| |||| || || || | ||| || ||| Sbjct 6838392 CGATGCACTTTATGAGACTTGCCCCAATTCTAACGGCCAGGG-GATAAAGTATCAGTTGA 6838450 Query 2073 TAGTAATGTGGAGCACCCCTCTTAAACCTAGCACTCGATACTCACTATCGCCAGCCCAAC 2132 | || |||||||||||||| | ||| || | | || | || |||| || || | Sbjct 6838451 TGGTCATGTGGAGCACCCCCCATAACCCGACTGCGCGCTTTTCTTTATCACCCAATCAGC 6838510 Query 2133 CTCCCGGCAAGAAGAGGAAGATTGTTCAAC-ACTCCTCAAATCCAGAGCCAGAGATAGTA 2191 | | || ||||| |||||||| | ||||| | | | || || ||||| | || Sbjct 6838511 CATCAGGGAAGAAAAGGAAGATCG-TCAACTATGCATGGAACCCTGAGCCGGCCTCGGTG 6838569 Query 2192 TTCGTTCCGGAACCCACTTCGTCAGAGCAGTCATTACCTGAGCGTCAAATAAAAGCGTAT 2251 ||||| || || ||| ||| ||||| || | ||||| || || || ||| | ||| Sbjct 6838570 TTCGTACCTGAGCCCGAGGTGTCTGAGCAATCCCTTCCTGAACGGCAGATTAAAACATAT 6838629 Query 2252 CTCCAGCGAGGGATAGAACTCAAGGGGAAGTCAGCAGAGGTTCCCAACTTCAAGATCACC 2311 ||| | ||| ||||| || | || || || | || | || || || || |||||| Sbjct 6838630 CTCAGGAAAGGAATAGAGCTTAGAGGAAAAACATCTGATATCCCTAATTTTAAAATCACC 6838689 Query 2312 AACGAGACTTTGGGTTTCTCTGATGCAAACCTCAAGTTACTATACCCCGATACCTCTTTG 2371 || || || ||||| || || ||| | | || || || ||||||| || || ||| || Sbjct 6838690 AATGAAACCTTGGGCTTTTCGAATGAAGATCTTAAAGTATTATACCCTGACACATCTATG 6838749 Query 2372 TATCCTGACAATCCTGTGTTTATATTAGAAGATGTGTT 2409 || || |||||||| || || | || || ||||| || Sbjct 6838750 TACCCGGACAATCCAGTATTCGTCTTGGAGGATGTATT 6838787 >seq1 Length=21770863 Score = 201 bits (222), Expect = 9e-48 Identities = 555/842 (66%), Gaps = 28/842 (3%) Strand=Plus/Plus Query 1650 ATGTATACAATGAAGGCATTGCGTAcccccccTCGATTGACGAGATGGAGGTAGGTGAGG 1709 ||||| | || || ||||| ||| |||| || || || || ||||| || ||||| | Sbjct 15625002 ATGTACATAACGAGGGCATAGCGGACCCTCCTTCAGGCGATGATATGGATGTTGGTGATG 15625061 Query 1710 GAAGACCAACTTTAGACAAGATCTTGGAATCCTCCATAGGCTCGGATTCTTTACCGAACT 1769 | || | ||| |||| | || |||| || | || | |||||| || | ||||||| Sbjct 15625062 AACGAACCACTCTAGATAGTATATTGGGCTCTACTATGGACTCGGAATCAGTCCCGAACT 15625121 Query 1770 TAGAGGACGGACCACCAGATCAAGAGGCAGCCTACCATGAAGGGGAGATGTATTCAACTA 1829 |||||||||||| || |||| || ||| ||| |||| || ||||||||| | | | Sbjct 15625122 TAGAGGACGGACTCCCCGATCCTGAATTAGCATACAATGAGGGTGAGATGTATGCGAGGA 15625181 Query 1830 TGATGACTAGTTACATGGATCAAGATAATGAGA-ACATGGACCTGAGTGCGGGACC---- 1884 || | | | || || | |||| |||| ||| || || || | Sbjct 15625182 TGGCCGCCAAT-AC-----TCCACATAAAGAGACACAAGGGATGGATGACGACAAACTGG 15625235 Query 1885 -GACTTGTTCCACTCCTCAACCTATTACCGGGATCCACCACAAAGAGACAATTAATGGCC 1943 | ||||||| |||||| ||| | ||| || ||||| || | |||| || | Sbjct 15625236 TGTCTTGTTCTACTCCTGTACCGAATACTAAATATCATCACAAGGAATTAGTTAACGGTC 15625295 Query 1944 GG-GTCACCCAGATGGTTTACATCGGTGAAACCTCTGATATGGCACTCATTAATAGATTG 2002 || |||| |||||||||| || ||| || ||||| |||| |||| | ||||| || Sbjct 15625296 GGAGTCATA-AGATGGTTTATATAGGTCCCACTTCTGACATGGGACTCGTCAATAGGTTA 15625354 Query 2003 CAAGATGAATTTGATGTTTTGTACAACACGTACCCGAATCGTAACAAACAAGGAGAGATT 2062 || ||||| || |||| | || | || | ||| ||| |||| || ||||| | Sbjct 15625355 CAGGATGAGTTCGATGCACTTTATGAGACTTGCCCCAATTCTAACGGCCA-GGAGATAAA 15625413 Query 2063 GTA-CACCTGATAGTAATGTGGAGCACCCCTCTTAAACCTAGCACTCGATACTCACTATC 2121 ||| || |||| || |||||||||||||| | ||| || | | || | || |||| Sbjct 15625414 GTATCAGTTGATGGTCATGTGGAGCACCCCCCATAACCCGACTGCGCGCTTTTCTTTATC 15625473 Query 2122 GCCAGCCCAACCTCCCGGCAAGAAGAGGAAGATTGTTCAAC-ACTCCTCAAATCCAGAGC 2180 || || || | || ||||| |||||||| | ||||| | | | || || |||| Sbjct 15625474 ACCCAATCAGCCATCAGGGAAGAAAAGGAAGATCG-TCAACTATGCATGGAACCCTGAGC 15625532 Query 2181 CAGAGATAGTATTCGTTCCGGAACCCACTTCGTCAGAGCAGTCATTACCTGAGCGTCAAA 2240 | | || ||||| || || ||| ||| ||||| || | ||||| || || | Sbjct 15625533 CGGCCTCGGTGTTCGTACCTGAGCCCGAGGTGTCTGAGCAATCCCTTCCTGAACGGCAGA 15625592 Query 2241 TAAAAGCGTATCTCCAGCGAGGGATAGAACTCAAGGGGAAGTCAGCAGAGGTTCCCAACT 2300 | ||| | |||||| | ||| ||||| || | || || || | || | || || | Sbjct 15625593 TTAAAACATATCTCAGGAAAGGAATAGAGCTTAGAGGAAAAACATCTGATATCCCTAATT 15625652 Query 2301 TCAAGATCACCAACGAGACTTTGGGTTTCTCTGATGCAAACCTCAAGTTAC--------- 2351 | || |||||||| || || ||||| || || ||| | | || || ||| Sbjct 15625653 TTAAAATCACCAATGAAACCTTGGGCTTTTCGAATGAAGATCTTAAAGTACATCCTTAAA 15625712 Query 2352 -TATACCCCGATACCTCTTTGTATCCTGACAATCCTGTGTTTATATTAGAAGATGTGTTT 2410 || | || || || ||| ||||||| |||||||| || || | || || ||||| || Sbjct 15625713 GTAGATCCTGACACATCTATGTATCCGGACAATCCAGTATTCGTCTTGGAGGATGTATTC 15625772 Query 2411 GCATCCACTAGACAACTAAACAAGATCAAGGTAAATTACCAGTTGTATGACCCGGTACTC 2470 ||| || | || | || || ||||||||| |||| || |||||||||| || ||| Sbjct 15625773 ACATATACCAAGCAGTTGAATAAAATCAAGGTACATTATCAACTGTATGACCCAGTGCTC 15625832 Query 2471 CC 2472 || Sbjct 15625833 CC 15625834 >seq3836 Length=1408 Score = 134 bits (148), Expect = 1e-27 Identities = 434/663 (65%), Gaps = 18/663 (3%) Strand=Plus/Minus Query 1601 TGGGATCACAAAAACGCCTTGGGTGAGTTTGAAAGCAATGCAGAATTGGATGTATACAAT 1660 |||||| | || | || | ||||| || ||||| | | || |||||||| | || Sbjct 1329 TGGGATAAGAACAGAGCACTAGGTGACTTGGAAAGTGACTCGGACCTGGATGTACATAAC 1270 Query 1661 GAAGGCATTGCGTAcccccccTCGATTGACGAGATGGAGGTAGGTGAGGGAAGACCAACT 1720 || ||||| ||| |||| | || || || ||||| || ||||| | | || | ||| Sbjct 1269 GAGGGCATAGCGGACCCTCTTTCAGGCGATGATATGGATGTTGGTGATGAACGAACCACT 1210 Query 1721 TTAGACAAGATCTTGGAATCCTCCATAGGCTCGGATTCTTTACCGAACTTAGAGGACGGA 1780 |||| | || |||| || | || | |||||| || | |||||||||||||||||| Sbjct 1209 CTAGATAGTATATTGGGCTCTACTATGGACTCGGAATCAGTCCCGAACTTAGAGGACGGA 1150 Query 1781 CCACCAGATCAAGAGGCAGCCTACCATGAAGGGGAGATGTATTCAACTATGATGACTAGT 1840 | || |||| || ||| ||| |||| || ||||||||| | | ||| | | Sbjct 1149 CTCCCCGATCCTGAATTAGCATACAATGAGGGTGAGATGTATGCGAGGATGGCCGCCA-A 1091 Query 1841 TACATGGATCAAGATAATGAGA-ACATGGACCTGAGTGCGGGA-----CCGACTTGTTCC 1894 ||| || | |||| |||| ||| || || || | | ||||||| Sbjct 1090 TAC-----TCCACATAAAGAGACACAAGGGATGGATGACGACAAACTGGTGTCTTGTTCT 1036 Query 1895 ACTCCTCAACCTATTACCGGGATCCACCACAAAGAGACAATTAATGGCCGG-GTCACCCA 1953 |||||| ||| | ||| || ||||| || | |||| || ||| |||| | Sbjct 1035 ACTCCTGTACCGAATACTAAATATCATCACAAGGAATTAGTTAACGGTCGGAGTCA-TAA 977 Query 1954 GATGGTTTACATCGGTGAAACCTCTGATATGGCACTCATTAATAGATTGCAAGATGAATT 2013 ||||||||| || ||| || ||||| |||| |||| | ||||| || || ||||| || Sbjct 976 GATGGTTTATATAGGTCCCACTTCTGACATGGGACTCGTCAATAGGTTACAGGATGAGTT 917 Query 2014 TGATGTTTTGTACAACACGTACCCGAATCGTAACAAACAAGGAGAGATTGTA-CACCTGA 2072 |||| | || | || | ||| ||| |||| | ||| || | ||| || ||| Sbjct 916 CGATGCACTTTATGAGACTTGCCCCAATTCTAAC-GGCCAGGGGATAAAGTATCAGTTGA 858 Query 2073 TAGTAATGTGGAGCACCCCTCTTAAACCTAGCACTCGATACTCACTATCGCCAGCCCAAC 2132 | || |||||||||||||| | ||| || | | || | || |||| || || | Sbjct 857 TGGTCATGTGGAGCACCCCCCATAACCCGACTGCGCGCTTTTCTTTATCACCCAATCAGC 798 Query 2133 CTCCCGGCAAGAAGAGGAAGATTGTTCAAC-ACTCCTCAAATCCAGAGCCAGAGATAGTA 2191 | | || ||||| |||||||| | ||||| | | | || || ||||| | || Sbjct 797 CATCAGGGAAGAAAAGGAAGATCG-TCAACTATGCATGGAACCCTGAGCCGGCCTCGGTG 739 Query 2192 TTCGTTCCGGAACCCACTTCGTCAGAGCAGTCATTACCTGAGCGTCAAATAAAAGCGTAT 2251 ||||| || || ||| ||| ||||| || | ||||| || || || ||| | ||| Sbjct 738 TTCGTACCTGAGCCCGAGGTGTCTGAGCAATCCCTTCCTGAACGGCAGATTAAAACATAT 679 Query 2252 CTC 2254 ||| Sbjct 678 CTC 676 >seq6848 Length=1252 Score = 114 bits (126), Expect = 1e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 2260 AGGGATAGAACTCAAGGGGAAGTCAGCAGAGGTTCCCAACTTCAAGATCACCAACGAGAC 2319 ||| ||||| || || || || || | || | || || || || |||||||| || || Sbjct 635 AGGAATAGAGCTTAAAGGAAAAACATCTGATATCCCTAATTTTAAAATCACCAATGAAAC 694 Query 2320 TTTGGGTTTCTCTGATGCAAACCTCAAGTTACTATACCCCGATACCTCTTTGTATCCTGA 2379 ||||| || || ||| ||| || || || ||||||| || || ||| ||||||| || Sbjct 695 CTTGGGCTTTTCAAATGAAAATCTTAAAGTATTATACCCTGACACATCTATGTATCCGGA 754 Query 2380 CAATCCTGTGTTTATATTAGAAGATGTGTTTGCATCCACTAGACAACTAAACAAGATCAA 2439 ||||| || || | || || ||||| || ||| || | || | || || ||||| Sbjct 755 AAATCCAGTATTCGTCTTGGAGGATGTATTCACATATACCAAGCAGTTGAATAAAATCAA 814 Query 2440 GGTAAATTACCAGTTGTATGACCCGGTACTCCC 2472 ||||||||| || |||||||||| || ||||| Sbjct 815 GGTAAATTATCAACTGTATGACCCAGTGCTCCC 847 >seq5378 Length=1164 Score = 89.7 bits (98), Expect = 4e-14 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 2321 TTGGGTTTCTCTGATGCAAACCTCAAGTTACTATACCCCGATACCTCTTTGTATCCTGAC 2380 ||||| || || ||| | | || || || |||||||||| || ||| ||||||| || Sbjct 12 TTGGGCTTTTCGAATGAAGATCTTAAAGTATTATACCCCGACACATCTATGTATCCGGAG 71 Query 2381 AATCCTGTGTTTATATTAGAAGATGTGTTTGCATCCACTAGACAACTAAACAAGATCAAG 2440 ||||| || || | || || ||||| || ||| || | || | || || |||||| Sbjct 72 AATCCAGTATTCGTCTTGGAGGATGTATTCACATATACCAAGCAGTTGAATAAAATCAAG 131 Query 2441 GTAAATTACCAGTTGTATGACCCGGTACTCCC 2472 |||||||| || |||||||||| || ||||| Sbjct 132 GTAAATTATCAACTGTATGACCCAGTGCTCCC 163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39529187344488