Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_031240.1 Length=11541 Score E Sequences producing significant alignments: (Bits) Value seq2146 91.5 1e-14 >seq2146 Length=32237 Score = 91.5 bits (100), Expect = 1e-14 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 7125 GAATTGCGGAAGGAACAGGGAAATTAGGACTAATTATTAATCACGATGAGACCATGAAAA 7184 |||||| || | ||| |||||||||||| || || ||| |||||||| ||||||| Sbjct 431 GAATTGATGACGACACAAAGAAATTAGGACTGATAATCAATAGGGATGAGACGATGAAAA 490 Query 7185 GCACGGAATTTCTGAATTATGGAAAAACCTGTGTCTTTAGGGGTAATATTAGGAATCTGG 7244 |||| || | | ||||| |||| ||| ||| | || || ||||| |||||||||| Sbjct 491 GCACTGAGTATATGAATAATGGGAAACATTGTATAATTCTAGGAAATATAAGGAATCTGG 550 Query 7245 AAACAAAGAGATGGT 7259 ||| |||| ||||| Sbjct 551 AAAATAAGATATGGT 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36812635615860