Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_002526.1 Length=14900 Score E Sequences producing significant alignments: (Bits) Value seq76293 122 8e-24 >seq76293 Length=3964 Score = 122 bits (134), Expect = 8e-24 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 9971 AATTGGCCAGAATTTCTCAAGGCGGTGAATGATTATGGTTTAGATTGGGAAAAATTGGTA 10030 |||||||| ||||| | || | || |||||| ||||| | || | ||| |||||| Sbjct 2923 AATTGGCCTCAATTTTTAAAAGAAGTAAATGATCATGGTATTGAGTTGGATGTATTGGTC 2982 Query 10031 ATTGGACTAAAGGCTAAGGAAAGAGAGCTTAAAGAAGAAGGGAGGtttttttCATTAATG 10090 ||||||||||| | || ||| ||||| | || |||||| || | |||||| |||||| Sbjct 2983 ATTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCTTTAATG 3042 Query 10091 TCTTATGAATTAAGGGATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTG 10150 || | || |||| |||||||| | ||| || || | ||| |||| | ||||| Sbjct 3043 TCCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGTT 3102 Query 10151 CCATTATTTGAAGGATTGACAATGGCTGATGA 10182 || ||||| | ||||| || ||||||||||| Sbjct 3103 CCCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47485134294174