Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_011639.1 Length=13196 Score E Sequences producing significant alignments: (Bits) Value seq76293 102 7e-18 >seq76293 Length=3964 Score = 102 bits (112), Expect = 7e-18 Identities = 117/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 8399 TCATTGGACTAAAAGCTAAAGAAAGAGAAATGAA-ACGGATTGGAAGATTCTTCTCTTTA 8457 ||||||||||||||| |||||| |||| |||| | || ||||||| || |||||| Sbjct 2981 TCATTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGA-AGGAAGATATTTTTCTTTA 3039 Query 8458 ATGTCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTT 8517 ||||| ||||| || ||||| ||||| | | || || || || || ||||| Sbjct 3040 ATGTCCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTT 3099 Query 8518 GTTCCTCTATTCCATGGATTAACTATGGCTGATGA 8552 ||||| ||||| | |||||||||||||||||||| Sbjct 3100 GTTCCCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42041100866382