Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_017685.1 Length=14717 Score E Sequences producing significant alignments: (Bits) Value seq76293 122 8e-24 >seq76293 Length=3964 Score = 122 bits (134), Expect = 8e-24 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 9784 AATTGGCCAGAATTTCTGAAAACAATCAATGATCATGGTTTGGATTGGGAAAAATTAGTA 9843 |||||||| ||||| | ||| | | |||||||||||| | || | ||| ||| || Sbjct 2923 AATTGGCCTCAATTTTTAAAAGAAGTAAATGATCATGGTATTGAGTTGGATGTATTGGTC 2982 Query 9844 ATAGGGTTGAAGGCTAAAGAAAGAGAATTAAAAATTGATGGCAGATTCTTCTCATTAATG 9903 || || | || | |||||| |||| | || || || || |||| || || |||||| Sbjct 2983 ATTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCTTTAATG 3042 Query 9904 TCATATGATATGAGAGATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTT 9963 || | ||| | ||||||||||| | ||||| || ||| || |||| | | |||| Sbjct 3043 TCCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGTT 3102 Query 9964 CCATTATTCAAAGGATTAACAATGGCTGATGA 9995 || |||||||| |||||||| ||||||||||| Sbjct 3103 CCCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46900475774640