Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_017714.1 Length=15867 Score E Sequences producing significant alignments: (Bits) Value seq76293 122 9e-24 >seq76293 Length=3964 Score = 122 bits (134), Expect = 9e-24 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 10962 TTGGCCTGAATTTCTTAAAAAAGTCAATGATTTTGGATTGGATTGGGAGAGTTTGGTAAT 11021 ||||||| ||||| | ||| |||| |||||| ||| | || | ||| ||||| || Sbjct 2925 TTGGCCTCAATTTTTAAAAGAAGTAAATGATCATGGTATTGAGTTGGATGTATTGGTCAT 2984 Query 11022 TGGGTTAAAAGCAAAGGAAAGGGAATTGAAGGATGCAGGTAGATTCTTTTCATTGATGAG 11081 ||| |||||| || ||| | || ||||| | ||| |||| ||||| || ||| Sbjct 2985 TGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCTTTAATGTC 3044 Query 11082 TTGGGAGTTAAGAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGAACATTTTGTGCC 11141 ||||| ||||||| ||||| || | || || |||| || ||| |||||||| || Sbjct 3045 CTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGTTCC 3104 Query 11142 ATTATTCAAAGGATTAACTATGGCAGATGA 11171 |||||||| |||||||||||||| ||||| Sbjct 3105 CTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50574559367340