Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_022580.1 Length=12676 Score E Sequences producing significant alignments: (Bits) Value seq76293 100 2e-17 >seq76293 Length=3964 Score = 100 bits (110), Expect = 2e-17 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 7710 TTGGTTATTGGTTTACAAGCCAAAGAAAGGGAAATCAAGGATGAGGGTCGATTTTTCTCT 7769 ||||| ||||| || ||| ||||||| | || | ||| || || ||| ||| ||| Sbjct 2977 TTGGTCATTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCT 3036 Query 7770 TTAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCAT 7829 |||||||| ||||| || | || ||||| | |||| ||||| | ||| ||| ||| Sbjct 3037 TTAATGTCCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCAT 3096 Query 7830 TTTGTTCCATTGTTCCATGGATTAACGATGGCAGATGA 7867 |||||||| || ||| | |||||||| ||||| ||||| Sbjct 3097 TTTGTTCCCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40384728508160