Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_022581.1 Length=11806 Score E Sequences producing significant alignments: (Bits) Value seq76293 87.8 1e-13 >seq76293 Length=3964 Score = 87.8 bits (96), Expect = 1e-13 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 6801 TTGATTATCGGACTGAAGGGAAAAGAGAGGGAACTaaaaaaaGCTGGACGGTTCTTTTCT 6860 ||| | || ||||| || || ||||| | || | || | || ||| | | |||||| Sbjct 2977 TTGGTCATTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCT 3036 Query 6861 CTAATGTCCTGGGAATTGAGGGAGTATTTTGTAATAACTGAATACCTGATCAAAACTCAT 6920 ||||||||||||| | || || ||||| ||||||| ||||| |||||||||||| Sbjct 3037 TTAATGTCCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCAT 3096 Query 6921 TACGTCCCTCTCTTTAAAGGATTGACCATGGCAGATGA 6958 | || || | || || ||||| || ||||| ||||| Sbjct 3097 TTTGTTCCCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37605083428880