Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_025362.1 Length=12240 Score E Sequences producing significant alignments: (Bits) Value seq76293 96.9 3e-16 >seq76293 Length=3964 Score = 96.9 bits (106), Expect = 3e-16 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 7428 GATGCATTGATTATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAttt 7487 |||| |||| | ||||| | |||| |||||| |||| |||| || |||||||| | Sbjct 2971 GATGTATTGGTCATTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATAT 3030 Query 7488 ttttCACTTATGTCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAG 7547 ||||| | ||||| ||||| || || || ||||| || || ||||| | || || Sbjct 3031 TTTTCTTTAATGTCCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAA 3090 Query 7548 AAGCATTTTGTACCATTGTTTAAAGGCTTGACTATGGCTGATG 7590 | |||||||| || || || || || || ||||||||||||| Sbjct 3091 ACTCATTTTGTTCCCTTATTCAACGGATTAACTATGGCTGATG 3133 Score = 96.9 bits (106), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 7667 TGCTAACCATGTCGATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGC 7726 |||||| ||| | |||||| | || ||||||||||||||| | ||||| | || Sbjct 3252 TGCTAATCATATAGATTATCAAAAATGGAACAACCACCAACGTCTCAAGTCAACATATGC 3311 Query 7727 AGTCTTTAGAGTCATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGA 7786 | | |||| || ||||||||||| | ||||||| | | |||| | || || ||||| Sbjct 3312 AATTTTTAAGGTTATGGGACAATTCTC-GGTTACCAAGAACTGATTACACGTACACATGA 3370 Query 7787 ATTTTTTGAGAAAAGCTGGATCTATTATGCTGGAAGATGTGATCGATTGTGGACTGATGG 7846 || ||||| ||||||||||| || ||||| | || | |||| | ||| |||| || Sbjct 3371 GTTCTTTGAAAAAAGCTGGATATACTATGCAGATAGGGGAGATCTAATGTACACTGTAGG 3430 Query 7847 GAACA 7851 | ||| Sbjct 3431 GGACA 3435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38991710974176