Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028230.1 Length=12020 Score E Sequences producing significant alignments: (Bits) Value seq76293 100 2e-17 >seq76293 Length=3964 Score = 100 bits (110), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 7421 TGCCAATCATATAGATTATACAAAGTGGAACAATCACCAGAGAAGGAAGTCCAATCACCC 7480 ||| ||||||||||||||| ||| |||||||| ||||| | ||||| | | | Sbjct 3252 TGCTAATCATATAGATTATCAAAAATGGAACAACCACCAACGTCTCAAGTCAACATATGC 3311 Query 7481 TGTTTTTACTGTGATGGGACAGTTTTTGGGGTACCCGAACCTGATCACTAGAACTCATGA 7540 |||||| || |||||||| || | || |||| | ||||| || | || ||||| Sbjct 3312 AATTTTTAAGGTTATGGGACAATTCTCGGT-TACCAAGAACTGATTACACGTACACATGA 3370 Query 7541 GTTCTTCGAAAAAAGCTGGATATATTATGCAG 7572 |||||| ||||||||||||||||| ||||||| Sbjct 3371 GTTCTTTGAAAAAAGCTGGATATACTATGCAG 3402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38288812218496