Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028239.1 Length=16133 Score E Sequences producing significant alignments: (Bits) Value seq76293 98.7 1e-16 >seq76293 Length=3964 Score = 98.7 bits (108), Expect = 1e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 11230 TTGGCCAGAGTTTTTGAAAAGGGTGAATGATCATGGGCTTGATTGGGAAAGTTTAGTAAT 11289 |||||| | ||||| ||| || ||||||||||| |||| | ||| || || || Sbjct 2925 TTGGCCTCAATTTTTAAAAGAAGTAAATGATCATGGTATTGAGTTGGATGTATTGGTCAT 2984 Query 11290 TGGTCTTAAGGCTAAAGAGAGGGAATTGAAAGAT-GCTGGGAGGtttttttCATTAATGA 11348 ||| || || | ||||| | || || ||||| | || || | |||||| |||||| Sbjct 2985 TGGACTAAAAGGCAAAGAACGAGAGGTG-AAGATAGAAGGAAGATATTTTTCTTTAATGT 3043 Query 11349 GCTGGGAGCTGAGGGAGTACTTCGTATTTACTGAATACCTAATTAAAGAGCATTTTGTAC 11408 |||||| || || || || ||| || | || ||||| ||| ||| |||||||| | Sbjct 3044 CCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGTTC 3103 Query 11409 CATTATTTAAGGGTCTGACTATGGCTGATGA 11439 | ||||| || || | |||||||||||||| Sbjct 3104 CCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 51424390876608