Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028241.1 Length=14478 Score E Sequences producing significant alignments: (Bits) Value seq76293 78.8 9e-11 >seq76293 Length=3964 Score = 78.8 bits (86), Expect = 9e-11 Identities = 112/158 (71%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 9631 TTGGTAATTGGCCTTAAAGGGAAAGAGAGGGAATTGAAAGAAGCCGGACGATTCTTTTCC 9690 ||||| ||||| || ||||| ||||| | || |||| || ||| ||| ||||| Sbjct 2977 TTGGTCATTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCT 3036 Query 9691 TTAATGTCCTGGGAATTAAGGGAATATTTCGTTGTAACTGAATTACTGATTAAACAACAT 9750 |||||||||||||| |||| || |||||| | |||| |||| || ||| ||| Sbjct 3037 TTAATGTCCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCAT 3096 Query 9751 TATGTAAAGTTGTTCAAAGGTTTGACCATGGCAGATGA 9788 | ||| || ||||| || || || ||||| ||||| Sbjct 3097 TTTGTTCCCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46136905358418