Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_028246.1 Length=14627 Score E Sequences producing significant alignments: (Bits) Value seq76293 179 3e-41 >seq76293 Length=3964 Score = 179 bits (198), Expect = 3e-41 Identities = 197/262 (75%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 9649 GAATACCAACCAAGAGAGTTTTATCTACTATGATTTCCAAGACTGCAAAAAATTGGCCTG 9708 |||||||||||| || ||| || ||||| | |||| | | | ||||||||| Sbjct 2873 GAATACCAACCAGGAAAGTATTGACTACTCTTTTTTCGAGGCCAAGTCGGAATTGGCCTC 2932 Query 9709 AATTTTTAAAAGAAATTAATGATCACGGTTTGGAGTGGGAAAAACTGGTAATAGGACTAA 9768 |||||||||||||| | |||||||| ||| | |||| ||| | |||| || ||||||| Sbjct 2933 AATTTTTAAAAGAAGTAAATGATCATGGTATTGAGTTGGATGTATTGGTCATTGGACTAA 2992 Query 9769 AAGCTAAAGAGAGAGAATTAAAGATAGAAGGTAGAtttttttCATTGATGTCATATGACA 9828 ||| ||||| |||| | ||||||||||| |||| |||||| || ||||| | || Sbjct 2993 AAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCTTTAATGTCCTGGGATC 3052 Query 9829 TGAGGGATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCA 9888 | || ||||| ||| |||| || ||||||| || |||| ||| ||| || ||||||| Sbjct 3053 TAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGTTCCCTTATTCA 3112 Query 9889 AAGGATTGACCATGGCTGATGA 9910 | ||||| || ||||||||||| Sbjct 3113 ACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46612938797820