Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031240.1 Length=11541 Score E Sequences producing significant alignments: (Bits) Value seq76293 165 6e-37 >seq76293 Length=3964 Score = 165 bits (182), Expect = 6e-37 Identities = 166/213 (78%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 6386 AATTGGCCGGAGTTTCTACAACGAATAAATGATTTTGGGATCTCAATTGAACAT-TTAGT 6444 |||||||| | ||| || || | |||||||| ||| || | | ||| | | || || Sbjct 2923 AATTGGCCTCAATTTTTAAAAGAAGTAAATGATCATGGTAT-TGAGTTGGATGTATTGGT 2981 Query 6445 GATTGGTTTAAAAGAGAAAGAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCTTTAAT 6504 ||||| |||||| |||||| ||||| ||||||||| |||||||| ||| ||||||| Sbjct 2982 CATTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCTTTAAT 3041 Query 6505 GTCTTGGGAGATTAGAGATTATTTTGTAATGACAGAATATTTAATTAAAACTCATTTTGT 6564 ||| ||||| | ||||||||||| |||| || ||||||| ||| |||||||||||||| Sbjct 3042 GTCCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGT 3101 Query 6565 GCCTCTCTTTGACGGATTAACAATGGCTGATGA 6597 || | || |||||||||| ||||||||||| Sbjct 3102 TCCCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36758409927720