Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031268.1 Length=8683 Score E Sequences producing significant alignments: (Bits) Value seq76293 86.0 3e-13 >seq76293 Length=3964 Score = 86.0 bits (94), Expect = 3e-13 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 3628 AAGAAGTAAATGACCATGGTCTTCCCAAGGATAGTCTCACT-ATTGGATTAAAGGGCAAG 3686 ||||||||||||| |||||| || |||| || | | |||||| |||| ||||| Sbjct 2942 AAGAAGTAAATGATCATGGTATTGAGTTGGAT-GTATTGGTCATTGGACTAAAAGGCAAA 3000 Query 3687 GAGCGAGAGTTAAAAGACGTGGGAAGATTTTTCTCTCTGATGACCTGGGATCTGAGAGAG 3746 || |||||| | || | ||||||| ||| ||| | ||| |||||||||| ||||| Sbjct 3001 GAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCTTTAATGTCCTGGGATCTAAGAGAT 3060 Query 3747 TATTTTGTATCCACTGAGTACCTCATTAAGATGTATTATGTTCCCTTGTTTGAAGGACTC 3806 ||||| || || || || || || | ||| ||||||||| || | ||| | Sbjct 3061 TATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGTTCCCTTATTCAACGGATTA 3120 Query 3807 ACCATGGCAGATGA 3820 || ||||| ||||| Sbjct 3121 ACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27627116092568