Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031278.1 Length=12247 Score E Sequences producing significant alignments: (Bits) Value seq76293 102 6e-18 >seq76293 Length=3964 Score = 102 bits (112), Expect = 6e-18 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 7246 ATTGGCCAACTTTTCTGAAACAAATCAACGATGAGGGTCTCGATATCAACGCCTTGATAA 7305 ||||||| ||| | ||| || | || ||| | ||| | || | | | ||| | | Sbjct 2924 ATTGGCCTCAATTTTTAAAAGAAGTAAATGATCATGGTATTGAGTTGGATGTATTGGTCA 2983 Query 7306 TAGGCTTAAGAGAGAAAGAAAGAGAAATCAAGATCAATGGCCGATTCTTTTCTCTGATGT 7365 | || ||| || |||||| |||| | ||||| | || ||| |||||| | |||| Sbjct 2984 TTGGACTAAAAGGCAAAGAACGAGAGGTGAAGATAGAAGGAAGATATTTTTCTTTAATGT 3043 Query 7366 CCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGATTAAAACCCATTTTGTTC 7425 |||||||| || |||||||||| | ||||| || ||| || ||||| |||||||||| Sbjct 3044 CCTGGGATCTAAGAGATTATTTCATAATAACCGAATATTCAATCAAAACTCATTTTGTTC 3103 Query 7426 CCCTCTTTTATGGACTGACAATGGCTGATGA 7456 || | || | ||| | || ||||||||||| Sbjct 3104 CCTTATTCAACGGATTAACTATGGCTGATGA 3134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39014075934584