Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031305.1 Length=10833 Score E Sequences producing significant alignments: (Bits) Value seq76293 84.2 2e-12 >seq76293 Length=3964 Score = 84.2 bits (92), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 6227 GCCAATCACATTGATTATGAGAAATGGAACAATCATCAACGTCAGGAGGCCACTGCGCCA 6286 || ||||| || |||||| | ||||||||||| || ||||||| || | || || Sbjct 3253 GCTAATCATATAGATTATCAAAAATGGAACAACCACCAACGTCTCAAGTCAACATATGCA 3312 Query 6287 GTGTTCAGGGTGATGGGACAATTCCTTGGATATCCAAACCTCATTGCGAGGACCCATGAG 6346 | || | ||| ||||||||||| || || || | | | || ||| | | || |||||| Sbjct 3313 ATTTTTAAGGTTATGGGACAATT-CTCGGTTACCAAGAACTGATTACACGTACACATGAG 3371 Query 6347 TTCTTTCAACAAAGCTTAATATACTA 6372 |||||| || |||||| |||||||| Sbjct 3372 TTCTTTGAAAAAAGCTGGATATACTA 3397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34496353932168