Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_031691.1 Length=11238 Score E Sequences producing significant alignments: (Bits) Value seq76293 122 6e-24 >seq76293 Length=3964 Score = 122 bits (134), Expect = 6e-24 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 4681 ATCTGCCATGGTTAGACCTTTAAATAATGGGACAAAATGCTTCTTGATCAGATATTCTGT 4740 ||| ||||| |||| || || ||||| || |||||||| | ||||| |||||| || Sbjct 3132 ATCAGCCATAGTTAATCCGTTGAATAAGGGAACAAAATGAGTTTTGATTGAATATTCGGT 3073 Query 4741 TATTACGAAGTATTCTCTCAACTCCCAGGACATGAGCGCAAAAAATCTTCCTTTTATTTT 4800 ||||| ||| || ||||| | ||||||||||| | | |||| ||||||||| ||| || Sbjct 3072 TATTATGAAATAATCTCTTAGATCCCAGGACATTAAAGAAAAATATCTTCCTTCTATCTT 3013 Query 4801 CAGTTCACGCTCTTTGCCTTTAAGTCCGATAAGAAGTTTCTCCTTATCCAGCCCCTGGTC 4860 || || || ||||||||||| ||||| || | | | ||| || | || || || Sbjct 3012 CACCTCTCGTTCTTTGCCTTTTAGTCCAATGACCAATACATCCAACTCAATACCATGATC 2953 Query 4861 ATTGA-TGCTTCTCAAGAATTCAGGCCAATT 4890 ||| | | ||| | || |||| ||||||||| Sbjct 2952 ATTTACTTCTT-TTAAAAATTGAGGCCAATT 2923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35790326641488