Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_030697.1 Length=9808 Score E Sequences producing significant alignments: (Bits) Value seq12400 78.8 6e-11 seq11629 78.8 6e-11 >seq12400 Length=3214 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 2 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 61 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 62 AAAAAAAA 69 >seq11629 Length=164188 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 163585 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 163526 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 163525 AAAAAAAA 163518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31261932014768