Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_031276.1 Length=7202 Score E Sequences producing significant alignments: (Bits) Value seq854 102 4e-18 >seq854 Length=667262 Score = 102 bits (112), Expect = 4e-18 Identities = 277/414 (67%), Gaps = 9/414 (2%) Strand=Plus/Minus Query 2157 TTAT-TAAACGTATGTACATAGTCTTAACAGAAGCACTGTTGGCAGAATACTTAATTAAA 2215 |||| |||| | |||| ||| || || || || | |||| || | | || || | | Sbjct 649046 TTATCTAAAAGGATGTGCATTGTATTGACTGAGATAATGTTAGCGGTACACATATTACCA 648987 Query 2216 TATTTTCCGGAAATTACCATGATTGATGATGAATTAAGTTTGGACaaaaaaaGATTAATG 2275 | ||||| || ||| | |||| ||| ||||| ||| ||||| || || |||| Sbjct 648986 TTGTTTCCCGAGATTGCAATGACTGACGATGAGTTATCATTGGATAAGAAGAGATATCAA 648927 Query 2276 TTTAATGATCCATCTCTATACA-ACCGGTCTGTATTTACTAGTTTAGATTTCTCTAAATG 2334 |||| || | | | | | ||| | |||| ||||||| |||||| ||||||| Sbjct 648926 TTTAC-GAAACGGCAAAAGGTATATCGGCATTTATTCACTAGTTCAGATTTTGCTAAATG 648868 Query 2335 GAACTCTAACATGAGAGAAGCAGAAACTCATGGTATTTTTCAAGCA-TTTGATCAATTGT 2393 ||||||||| |||||||| | |||||| || | | ||||| || | |||| | || | Sbjct 648867 GAACTCTAATATGAGAGAGGAAGAAAC-AATCGGAATTTTCGAGGATTTTGGTAGCTTAT 648809 Query 2394 TCGGATTT--ACAAATTGTTTTCAACGAACTCATGAGATGTTTAAAGATTCATACATCTA 2451 | |||||| || |||| | ||| | || | ||| ||||| || || | || || Sbjct 648808 TTGGATTTGAACGAATT-TATTC-TTGTACACGTGAAATGTTCAACACCTCTTTTATGTA 648751 Query 2452 TTTATTAAACGGATCATATTTGCCAACTTATCGAGGAGGACATTTTATTTCCGATTTAGG 2511 | |||||| ||||| ||| | || |||| ||| || ||||||| || | || Sbjct 648750 CTCATTAAATGGATCTTATCTCCCGACTTTCTCAGGGGGTTATTTTATCGGTGACCTCGG 648691 Query 2512 ATCATGGTATGGTCATTTAGGGGGCATCGAGGGACTACGCCAAAAAGGATGGAC 2565 || ||||| || || || ||||| || || || | | | |||||| ||||| Sbjct 648690 GTCTTGGTACGGACACTTTGGGGGGATAGAAGGGTTGAGACGAAAAGGTTGGAC 648637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22924088633584