Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_030697.1 Length=9808 Score E Sequences producing significant alignments: (Bits) Value seq23957 84.2 1e-12 seq109163 78.8 6e-11 >seq23957 Length=1035 Score = 84.2 bits (92), Expect = 1e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 9661 GAGGGGGATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATC 9720 |||| |||||||||||||||||| ||| || |||||| ||| |||||||||||| ||| Sbjct 535 GAGGTAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGGGGTCGCCGTATC 594 Query 9721 CTTaaaaaaaaCAAGA 9736 || ||||||| |||| Sbjct 595 ATTTAAAAAAAAAAGA 610 >seq109163 Length=404 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 91 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 32 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 31 AAAAAGAA 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31216238455472