Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_011639.1 Length=13196 Score E Sequences producing significant alignments: (Bits) Value seq1648 82.4 6e-12 >seq1648 Length=31512 Score = 82.4 bits (90), Expect = 6e-12 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 10276 AAGGGCCCTTACCCACCATATCTCGGATCTAAAACATCTGAATCAACTTCTATAATCCAA 10335 ||||| |||||| |||| ||||| ||||||||| ||| || ||| | | | Sbjct 19658 AAGGGACCTTACAAGGCATACCTCGGGTCTAAAACAAAGGAAAGTACATCTCTCTTGCGG 19717 Query 10336 CCCTGGGAGAAAGAGACAAATATCCCTCTTATTAGAAGGGCATCAAAATTAAGGAATGCA 10395 || ||||| || |||| || |||||||| || ||||| ||| | | | || || ||| Sbjct 19718 CCTTGGGAAAATGAGAGCAAGATCCCTCTCATCAGAAGAGCAGCGGACCTGAGAAAGGCA 19777 Query 10396 ATATCATGGTTCATTAATCCTGATTCTAATTTAGCCAAATCAATCATGGAGAATATGAGA 10455 | |||||||||||||| |||| || |||| | |||| || || |||| || Sbjct 19778 TTCGGATGGTTCATTAATCAACATTCGAACTTAGGCCAATCCATATTGTCGAATCTGTAT 19837 Query 10456 TCCTTAACAGGGGA-AGATTGGGGAGATG 10483 || | ||||| || ||| |||| ||||| Sbjct 19838 GCCCTCACAGGTGAGAGA-TGGGAAGATG 19865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42107351523075