Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19]
2,975 sequences; 341,147,348 total letters
Query= NC_011639.1
Length=13196
Score E
Sequences producing significant alignments: (Bits) Value
seq1648 82.4 6e-12
>seq1648
Length=31512
Score = 82.4 bits (90), Expect = 6e-12
Identities = 145/209 (69%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 10276 AAGGGCCCTTACCCACCATATCTCGGATCTAAAACATCTGAATCAACTTCTATAATCCAA 10335
||||| |||||| |||| ||||| ||||||||| ||| || ||| | | |
Sbjct 19658 AAGGGACCTTACAAGGCATACCTCGGGTCTAAAACAAAGGAAAGTACATCTCTCTTGCGG 19717
Query 10336 CCCTGGGAGAAAGAGACAAATATCCCTCTTATTAGAAGGGCATCAAAATTAAGGAATGCA 10395
|| ||||| || |||| || |||||||| || ||||| ||| | | | || || |||
Sbjct 19718 CCTTGGGAAAATGAGAGCAAGATCCCTCTCATCAGAAGAGCAGCGGACCTGAGAAAGGCA 19777
Query 10396 ATATCATGGTTCATTAATCCTGATTCTAATTTAGCCAAATCAATCATGGAGAATATGAGA 10455
| |||||||||||||| |||| || |||| | |||| || || |||| ||
Sbjct 19778 TTCGGATGGTTCATTAATCAACATTCGAACTTAGGCCAATCCATATTGTCGAATCTGTAT 19837
Query 10456 TCCTTAACAGGGGA-AGATTGGGGAGATG 10483
|| | ||||| || ||| |||| |||||
Sbjct 19838 GCCCTCACAGGTGAGAGA-TGGGAAGATG 19865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 42107351523075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |