Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20zea_20[genbank_20GCA_5F002150865.1_202017-05-19] 2,975 sequences; 341,147,348 total letters Query= NC_028241.1 Length=14478 Score E Sequences producing significant alignments: (Bits) Value seq1648 95.1 1e-15 >seq1648 Length=31512 Score = 95.1 bits (104), Expect = 1e-15 Identities = 199/292 (68%), Gaps = 10/292 (3%) Strand=Plus/Plus Query 11524 AAAGGACCATACAGCCCTTACCTAGGGAGTAGGACATTGGAAAGCACCAGCATATTGCAG 11583 || ||||| |||| | ||||| ||| || ||| |||||| || | |||| | Sbjct 19658 AAGGGACCTTACAAGGCATACCTCGGGTCTAAAACAAAGGAAAGTACATCTCTCTTGCGG 19717 Query 11584 CCTTGGGAGAAGGAAACTAGAATCCCTGTAATCAAAAGAGCAGCGGATCTAAGGAAAGCC 11643 |||||||| || || | | |||||| | |||| |||||||||||| || | ||||| | Sbjct 19718 CCTTGGGAAAATGAGAGCAAGATCCCTCTCATCAGAAGAGCAGCGGACCTGA-GAAAGGC 19776 Query 11644 ATATC--TTGGTTCATTGATGAGGATTCAAATTTAGCTAAATCTATTTACAATAATCTGT 11701 || || ||||||||| || | |||| || |||| |||| || | ||||||| Sbjct 19777 AT-TCGGATGGTTCATTAATCAACATTCGAACTTAGGCCAATCCATATTGTCGAATCTGT 19835 Query 11702 CAGCACTAACCGGTGAAACTTGG---GATGAGCGGATAGAAGGATTTAAAAGAACAGGAA 11758 || || || ||||| | ||| ||||| | | ||| | | |||| ||||| Sbjct 19836 ATGCCCTCACAGGTGAGAGATGGGAAGATGACCAGCCAGAGAAAGT---AAGATCAGGAT 19892 Query 11759 GTCCCCTCCATAGATTCACATGTTCAAGGGTGAGTGCAGGTGGGTACACTGC 11810 | |||||||||| |||| |||||| || ||| ||| || |||| ||| Sbjct 19893 CTACCCTCCATAGGTTCAGTTGTTCACGGCAAAGTCAAGGGGGCTACATTGC 19944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46209610406925