Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_007652.1 Length=14071 Score E Sequences producing significant alignments: (Bits) Value seq14191 78.8 8e-11 >seq14191 Length=210284 Score = 78.8 bits (86), Expect = 8e-11 Identities = 130/180 (72%), Gaps = 12/180 (7%) Strand=Plus/Plus Query 6606 ACAACACAAGCAACTGCACAACTGACAACACCAACAGCCCCAAAAGCAAGCATAGCACCC 6665 |||||| || ||| ||| | |||||||||||| | || || ||| | | || || Sbjct 156515 ACAACAACAGAAACAACACCAACAACAACACCAACAACAACAGAAACAACAACAACA-CC 156573 Query 6666 AAGAACAGACAGGCAACAACCaaaaaaaCCGAAACGGGCACCacaacaacaagcagagca 6725 || |||| ||| | |||||| | || ||| ||||| || |||||||||| ||| | Sbjct 156574 AACAACA-ACA-GAAACAACAACAACAACAGAAAC---AACAACAACAACAA-CAG---A 156624 Query 6726 aagaaaaccaacaacccaacagagacagcaacaacaactctcaaagcaacaacagaaaca 6785 || || | |||||| ||||||| ||| |||||||| | | | |||||||||||||| Sbjct 156625 AACAACAACAACAA--CAACAGAAACAACAACAACACCAACAACAACAACAACAGAAACA 156682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 44899453356000