Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_031275.1 Length=9591 Score E Sequences producing significant alignments: (Bits) Value seq16225 78.8 6e-11 >seq16225 Length=166739 Score = 78.8 bits (86), Expect = 6e-11 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 6267 AAGAGAGCATCTAGGATTGGAACTGAGTCCCAGGAGACTATACCATCTGTCAACACAAAG 6326 |||||||| | ||||| || || || ||||| |||| ||| ||||| ||||| || ||| Sbjct 22229 AAGAGAGCGTGCAGGATAGGGACGGAATCCCAAGAGAATATTCCATCAGTCAATACGAAG 22170 Query 6327 CTTAGTGGAGTTTTTGCAACTGGCATTGCCACAGCA 6362 ||||| || || ||| ||||||||||| || ||| Sbjct 22169 CTTAGCGGTTGTTGTGCGACTGGCATTGCAACTGCA 22134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30569808360000