Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028243.1 Length=10795 Score E Sequences producing significant alignments: (Bits) Value seq843932 82.4 5e-12 seq547886 80.6 2e-11 >seq843932 Length=427 Score = 82.4 bits (90), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 1963 TACGGGGTTCCAATCTTTTCCAAGACTCACGAAGCATACCAGAGGTCCTTCATTTACGTA 2022 |||||| ||| || ||||||||||| || || || || | | ||| | ||| | Sbjct 139 TACGGGACTCCTATATTTTCCAAGACGCAACTTGCCTA-CAAAACACTTTCCTGTACATG 197 Query 2023 CCTGATGCTGACGAAGTGTATTCGTGGGACGGTCAACTTGGTGGGATAGAAGGACTGAAC 2082 || ||| || ||||||| | ||| |||||||| ||||| || || ||| | || Sbjct 198 CCGGATCAGGATAAAGTGTACTATTGGAACGGTCAAGAAGGTGGAATTGACGGATTAAAT 257 Query 2083 CAAGACACATGGGTCCTGACCTACATACACCAAATTAAGGTGTGTATGGAGGACCATCCG 2142 || || ||||||| || ||||| || || || || || |||||| | || ||| Sbjct 258 CAGTACTCATGGGTATACACATACATTCATCAGATAAAAGTATGTATGAAAGATTTTCCT 317 Query 2143 TATCCGTATTACATTCTGTGCAAGGGCGATGACCT 2177 ||||| ||| |||| || ||||| | ||||| || Sbjct 318 TATCCTTATCACATCCTCTGCAAAGAAGATGATCT 352 >seq547886 Length=256 Score = 80.6 bits (88), Expect = 2e-11 Identities = 136/197 (69%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1971 TCCAATCTTTTCCAAGACTCACGAAGCATACCAGAGGTCCTTCATTTACGTACCTGATGC 2030 ||| ||||||||||| || || || || |||| | || | ||| | ||||| Sbjct 11 TCCTATCTTTTCCAAAACACAGATCGCCTATCAGAAAACATTTTTGTACATGCCTGACCA 70 Query 2031 TGACGAAGTGTATTCGTGGGACGGTCAACTTGGTGGGATAGAAGGACTGAACCAAGACAC 2090 || | || |||| ||||| ||||| || ||||| || || | || ||| |||| Sbjct 71 GGATAAGGTATATTACTGGGATGGTCAGGAAGGAGGGATTGACGGGTTAAATCAATACAC 130 Query 2091 ATGGGTCCTGACCTACATACACCAAATTAAGGTGTGTATGGAGGACCATCCGTATCCGTA 2150 ||||| || || || ||||| || ||||| |||||| || || ||| || ||||| Sbjct 131 TTGGGTGTATACTTATATCCACCAGATCAAGGTCTGTATGAAGAACTTTCCTTACCCGTA 190 Query 2151 TTACATTCTGTGCAAGG 2167 | | |||||||| |||| Sbjct 191 TCATATTCTGTGTAAGG 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 33956933628548