Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028260.1 Length=10877 Score E Sequences producing significant alignments: (Bits) Value seq1181625 93.3 3e-15 >seq1181625 Length=1136 Score = 93.3 bits (102), Expect = 3e-15 Identities = 207/304 (68%), Gaps = 10/304 (3%) Strand=Plus/Plus Query 2311 GTAGAGCAGCCTCAGACGTTCAGAAAAATCCAGAAATGCTACGGAGCAAACAACGCATTT 2370 |||||| |||||| || ||||| ||||| ||||||||||| || |||||||| || || Sbjct 17 GTAGAGATGCCTCAAACTTTCAGGAAAATTCAGAAATGCTATGGGGCAAACAATGCTTTC 76 Query 2371 CTTACCACGGTAGACGATTATATCGCAAGCTCTTTTAGCAATGCTCATAGCGCATCTAAG 2430 | | ||| ||| ||||| || ||| || ||||| ||||| || || ||||| ||| Sbjct 77 ATGAACACAACAGATGATTACATTGCATCATCGTTTAGTAATGCACACAGTGCATCGAAG 136 Query 2431 AACGCTCCGTCGCCTATACAGTGCTTCATTACGGCCCTCTTTTGGAGTTACGATGCTCTA 2490 | | ||| | || || || | |||| || || |||||| | | | | || Sbjct 137 ACAGGTCCAACACCCATTTCATGTTACATTGTTGCACTTTTTTGGTCGTTCCACAC-CTT 195 Query 2491 ACGCTACACGCCAAGTACGGAGAACTCTGTGACGAGGAATTGGTAGCTCTCCTCTG-TGC 2549 | || ||| | | |||| || || || || | || | || || || || ||| Sbjct 196 ATGCAACAAGTC-AGTATATAGCACCATG-CACAATGATCAGATA--TCAGCTTTGATGC 251 Query 2550 ----CCCTAACCTAGTGGGAGGGTTTCCTATTATCTTTCTCCACAACTTTTTCGTCAGAG 2605 ||||| ||| | || || |||||| |||||| ||| ||||||||||| || |||| Sbjct 252 TCGTTCCTAATCTACTTGGGGGTTTTCCTGTTATCTATCTTCACAACTTTTTTGTGAGAG 311 Query 2606 CCGA 2609 | || Sbjct 312 CTGA 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34215737286652