Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_028264.1 Length=10017 Score E Sequences producing significant alignments: (Bits) Value seq547886 100 2e-17 seq167430 78.8 6e-11 >seq547886 Length=256 Score = 100 bits (110), Expect = 2e-17 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 2026 CTCTCTTCTCCAAAACTATGAAAGCATATGAAAAATCATTTGTAATCATGCCAGACGAAG 2085 || |||| |||||||| || || ||| | ||| ||||| | |||||| ||| | | Sbjct 13 CTATCTTTTCCAAAACACAGATCGCCTATCAGAAAACATTTTTGTACATGCCTGACCAGG 72 Query 2086 GTCAAGTGTACTACTGGGATGGTCAGATGGGAGGAATCGAAGGTCTCAATCAATATACGT 2145 | | || || ||||||||||||||| ||||| || || || | |||||||| || | Sbjct 73 ATAAGGTATATTACTGGGATGGTCAGGAAGGAGGGATTGACGGGTTAAATCAATACACTT 132 Query 2146 GGGTCGACACATATATCAACCAGGTTAAGGTGTGTATGGAGCCATATAATTTTCCCTACC 2205 |||| | || |||||| ||||| | ||||| |||||| || | | || || || | Sbjct 133 GGGTGTATACTTATATCCACCAGATCAAGGTCTGTATGAAGAACTTTCCTTACCCGTATC 192 Query 2206 ATATATTGTGTCGTGGTGACGATCTTCGAGTGG 2238 |||| ||||| | |||||||| | |||| Sbjct 193 ATATTCTGTGTAAGGAAGACGATCTAAGGGTGG 225 >seq167430 Length=232 Score = 78.8 bits (86), Expect = 6e-11 Identities = 111/156 (71%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 2031 TTCTCCAAAACTATGAAAGCATATGAAAAATCATTTGTAATCATGCCAGACGAAGGTCAA 2090 || |||||||| || || ||| | || ||||| | |||||| ||| | | | | Sbjct 63 TTTTCCAAAACACAGATCGCCTATCAGAATACATTTTTGTACATGCCTGACCAGGATAAG 122 Query 2091 GTGTACTACTGGGATGGTCAGATGGGAGGAATCGAAGGTCTCAATCAATATACGTGGGTC 2150 || | ||||||||||||||| ||||| || || || | |||||||| || ||||| Sbjct 123 GTATGTTACTGGGATGGTCAGGAAGGAGGGATTGACGGGTTAAATCAATACACTTGGGTG 182 Query 2151 GACACATATATCAACCAGGTTAAGGTGTGTATGGAG 2186 | || |||||| | ||| | ||||| |||||| || Sbjct 183 TATACTTATATCCATCAGATCAAGGTCTGTATGAAG 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31501455018732